Protein
MCA_06343_1
Length
832 amino acids
Gene name: RIM20
Description: pH-response regulator protein RIM20
Browser: contigD:3911435-3913934+
RNA-seq: read pairs 1396, FPKM 20.7, percentile rank 42.4% (100% = highest expression)
Protein function
| Annotation: | RIM20 | pH-response regulator protein RIM20 | |
|---|---|---|---|
| KEGG: | K12200 | PDCD6IP | programmed cell death 6-interacting protein |
| EGGNOG: | 0PGMC | RIM20 | pH-response regulator protein palA rim-20 |
| SGD closest match: | S000005801 | RIM20 | pH-response regulator protein palA/RIM20 |
| CGD closest match: | CAL0000180949 | RIM20 | pH-response regulator protein palA/RIM20 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X5F6_GEOCN | 39.55% | 847 | 0.0 | Similar to Saccharomyces cerevisiae YOR275C RIM20 Protein involved in proteolytic activation of Rim101p in response to alkaline pH OS=Geotrichum candidum GN=BN980_GECA03s01935g PE=4 SV=1 |
| UniRef50_A0A0J9X5F6 | 39.55% | 847 | 0.0 | Similar to Saccharomyces cerevisiae YOR275C RIM20 Protein involved in proteolytic activation of Rim101p in response to alkaline pH n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X5F6_GEOCN |
| MIA_04460_1 | 41.42% | 705 | 3e-159 | MIA_04460_1 |
| A0A060T5D9_BLAAD | 35.01% | 754 | 4e-138 | ARAD1B03784p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B03784g PE=4 SV=1 |
| A0A1E3PPH3_9ASCO | 34.34% | 763 | 3e-124 | BRO1-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49768 PE=4 SV=1 |
| PALA_YARLI | 32.85% | 761 | 1e-115 | pH-response regulator protein RIM20 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RIM20 PE=3 SV=2 |
| A0A167D6K9_9ASCO | 39.27% | 550 | 3e-115 | Rim20p OS=Sugiyamaella lignohabitans GN=RIM20 PE=4 SV=1 |
| PALA_CANAL | 32.38% | 766 | 5e-110 | pH-response regulator protein palA/RIM20 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RIM20 PE=3 SV=2 |
| A0A1E4TFA9_9ASCO | 30.10% | 764 | 6e-68 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_106721 PE=4 SV=1 |
| PALA_YEAST | 24.87% | 756 | 3e-37 | pH-response regulator protein palA/RIM20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RIM20 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0355
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
832
Detailed signature matches
-
-
PF13949 (ALIX_LYPXL...)
-
no IPR
Unintegrated signatures
-
-
-
-
-
cd09241 (BRO1_ScRim...)
-
mobidb-lite (disord...)
Residue annotation
-
putative ESCRT-III...
Protein sequence
>MCA_06343_1 MTSKSLLAVPFRHSEPIDLGAGLISYLKEKLLIQITSQISKECDTIDKQRNRILNISPHLSSLESLFLYYANFTTSVMTK FPSDSIAVKFVWHGTLGYTEAGGVRSSSSRFEQLNVLFCIAALYTNLATLQTFSASNDLFGKTSIDSASNDSDSKAIKLA YSYLQNASACFRYMIDEILPKLEQSPPLDLDANTLETLYYMCLAQAQELFWAKATMGDNAKNSLVSKLAMKVSDYYSETL IYAQRSPNLKAEWINHLACKKWYALASAYYRSSAECLSKSKYGEEIARLRQALQACTAGLSQSRYVSPIVVEDLKQLQAK AKEALKRAESDNDLIYLQEVPVESSLSEIKGISMVNPSLPEAVANPVQYLEKTKRCDLLFTSVLPYVIYQTANTYKEKLL NHVEIHFKKEVKDIDTKHEKVLHDLNLPGALEAVEKPVGLPDSLIAHINEIRDMGGISRIEQSLMDIRKLALSSRHLLQE GQETLNYENKEDMMMRESQGTQRWARATSKEAGAELWSTLEKMQELLNQAAEGDKTILENFNSSKRNIQLLSQGQETIEK MIPESTSILNSNQYFEHVTQELKECLLKSRGLKLLREEFVKNMLNLVRNMDILSQNIKLYNEMLRSGKDSNPEAKDFEMV YNENLRIVERQEKKIEELREQQEIQNERIKQLYKEFEAVKDTDDTNINRENAIQGFEVAFHEYKKIIDNLEQGRQFYNQL LEQLHAAIDQCKQFVYFRRVEGRELEMAITNRSLQQLRVDNPVVEADDDEGNYVDEDNKQQQAEQLTTDQYQQQQQQYVQ KPNKEEAPSHKDGRRNQQQRKTWQPSDGIRFA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.