Protein

MCA_06342_1

Length
688 amino acids

Gene name: CEF1

Description: Pre-mRNA-splicing factor CEF1; protein with two Myb DNA-binding domains

Browser: contigD:3908740-3911137+

RNA-seq: read pairs 1793, FPKM 32.2, percentile rank 54.7% (100% = highest expression)

Protein function

Annotation:CEF1Pre-mRNA-splicing factor CEF1; protein with two Myb DNA-binding domains
KEGG:K12860CDC5L pre-mRNA-splicing factor CDC5/CEF1
EGGNOG:0PFBZCEF1factor cef-1
SGD closest match:S000004826CEF1Pre-mRNA-splicing factor CEF1
CGD closest match:CAL0000201853CEF1Pre-mRNA-splicing factor CEF1

Protein alignments

%idAln lengthE-value
MIA_04459_170.33%3643e-161MIA_04459_1
A0A0J9XDA3_GEOCN65.79%3808e-153Similar to Saccharomyces cerevisiae YMR213W CEF1 Essential splicing factor OS=Geotrichum candidum GN=BN980_GECA10s03651g PE=4 SV=1
UniRef50_A0A0J9XDA365.79%3802e-149Similar to Saccharomyces cerevisiae YMR213W CEF1 Essential splicing factor n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XDA3_GEOCN
A0A1E3PPU1_9ASCO63.46%3645e-137Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_64473 PE=4 SV=1
A0A161HNT1_9ASCO56.96%3814e-124Cef1p OS=Sugiyamaella lignohabitans GN=CEF1 PE=4 SV=1
A0A060T4Z3_BLAAD55.04%3871e-115ARAD1B03762p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B03762g PE=4 SV=1
CEF1_YARLI55.28%3604e-115Pre-mRNA-splicing factor CEF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CEF1 PE=3 SV=1
A0A1E4TGG2_9ASCO47.26%3471e-87Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31653 PE=4 SV=1
CEF1_CANAL54.18%2758e-80Pre-mRNA-splicing factor CEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CEF1 PE=3 SV=2
CEF1_YEAST50.18%2771e-78Pre-mRNA-splicing factor CEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CEF1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1044

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 688

Detailed signature matches

  1. Domain IPR009057
    Homeobox domain-like
    1. SSF46689 (Homeodoma...)
  2. Domain IPR001005
    SANT/Myb domain
    1. SM00717 (sant)
  3. Domain IPR017930
    Myb domain
    1. PS51294 (HTH_MYB)
  4. Domain IPR021786
    Pre-mRNA splicing factor component Cdc5p/Cef1
    1. PF11831 (Myb_Cef)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.10.60
  3. PF13921 (Myb_DNA-bi...)
  4. cd00167 (SANT)
  5. cd11659 (SANT_CDC5_II)
  6. mobidb-lite (disord...)

Residue annotation

  1. DNA binding site c...
  2. putative DNA bindi...
  3. putative Na bindin...

Protein sequence

>MCA_06342_1
MPPVYIKGGVWTNVEDEILRAAVSKYGPNQWSRVSSLLARKTAKQAKARWEQWLSPNVKKTEWSRDEDEKLLHLAKIMPT
QWQTIAPIVGRTATQCIERYQQLLEEAEQEENKEENGNSNKSIDLSLKGLGAEASAPAGFNRRSKFGELDPTLESRPARP
DAIDMDDDEKEMLSEARARLANTQGKKAKRKDRERILEESRRLAALQKRRELKLAGLNTKLKRKTRGQVDYNADIPFEHK
PAPGFYDTTEEQIQNLKAKAEFERKTNKKGVDIVKSQPKVTIFIMNSDKFSKKRYRDPDAAARAAEQAAQARAERIQQLN
KFDQLSKRRKLVLPSPEVQDEEIEKIVKYGSRGEKMKQLYTGPDENDANNFQVSEYKDNLSDQEKENSDHEDASELLRRK
LQNLPKPLNNFEIMLPEEEEEQEEEQEQKIQDLDRDGDSNMVEDEGEKEIGIKKLKKEELKKRFESRSEALVKDLPRILP
TYLNHLQPLAGNKQENLKILDVIKQQIISDAKEYPIPEYSSVKTDGSLMPILSYEMRQKALSLVEQEVKKNENCDTIIGD
LSKKLSDLYTPITELKDKIALKNHCVRQLEKMSSESSEIQERLQKTMGGYLKRQEILGSKMSDAFKALTNLQTDSAKFTE
SFNAAKMALDMRVRFLQEDVDYLVSLEQWGQDLYKDYQSELISLENGS

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003677 DNA binding

Cellular Component

None predicted.