Protein
MCA_06342_1
Length
688 amino acids
Gene name: CEF1
Description: Pre-mRNA-splicing factor CEF1; protein with two Myb DNA-binding domains
Browser: contigD:3908740-3911137+
RNA-seq: read pairs 1793, FPKM 32.2, percentile rank 54.7% (100% = highest expression)
Protein function
Annotation: | CEF1 | Pre-mRNA-splicing factor CEF1; protein with two Myb DNA-binding domains | |
---|---|---|---|
KEGG: | K12860 | CDC5L | pre-mRNA-splicing factor CDC5/CEF1 |
EGGNOG: | 0PFBZ | CEF1 | factor cef-1 |
SGD closest match: | S000004826 | CEF1 | Pre-mRNA-splicing factor CEF1 |
CGD closest match: | CAL0000201853 | CEF1 | Pre-mRNA-splicing factor CEF1 |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MIA_04459_1 | 70.33% | 364 | 3e-161 | MIA_04459_1 |
A0A0J9XDA3_GEOCN | 65.79% | 380 | 8e-153 | Similar to Saccharomyces cerevisiae YMR213W CEF1 Essential splicing factor OS=Geotrichum candidum GN=BN980_GECA10s03651g PE=4 SV=1 |
UniRef50_A0A0J9XDA3 | 65.79% | 380 | 2e-149 | Similar to Saccharomyces cerevisiae YMR213W CEF1 Essential splicing factor n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XDA3_GEOCN |
A0A1E3PPU1_9ASCO | 63.46% | 364 | 5e-137 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_64473 PE=4 SV=1 |
A0A161HNT1_9ASCO | 56.96% | 381 | 4e-124 | Cef1p OS=Sugiyamaella lignohabitans GN=CEF1 PE=4 SV=1 |
A0A060T4Z3_BLAAD | 55.04% | 387 | 1e-115 | ARAD1B03762p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B03762g PE=4 SV=1 |
CEF1_YARLI | 55.28% | 360 | 4e-115 | Pre-mRNA-splicing factor CEF1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CEF1 PE=3 SV=1 |
A0A1E4TGG2_9ASCO | 47.26% | 347 | 1e-87 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31653 PE=4 SV=1 |
CEF1_CANAL | 54.18% | 275 | 8e-80 | Pre-mRNA-splicing factor CEF1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CEF1 PE=3 SV=2 |
CEF1_YEAST | 50.18% | 277 | 1e-78 | Pre-mRNA-splicing factor CEF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CEF1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1044
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
688
Detailed signature matches
no IPR
Unintegrated signatures
-
-
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PF13921 (Myb_DNA-bi...)
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cd00167 (SANT)
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cd11659 (SANT_CDC5_II)
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mobidb-lite (disord...)
Residue annotation
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DNA binding site c...
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putative DNA bindi...
-
putative Na bindin...
Protein sequence
>MCA_06342_1 MPPVYIKGGVWTNVEDEILRAAVSKYGPNQWSRVSSLLARKTAKQAKARWEQWLSPNVKKTEWSRDEDEKLLHLAKIMPT QWQTIAPIVGRTATQCIERYQQLLEEAEQEENKEENGNSNKSIDLSLKGLGAEASAPAGFNRRSKFGELDPTLESRPARP DAIDMDDDEKEMLSEARARLANTQGKKAKRKDRERILEESRRLAALQKRRELKLAGLNTKLKRKTRGQVDYNADIPFEHK PAPGFYDTTEEQIQNLKAKAEFERKTNKKGVDIVKSQPKVTIFIMNSDKFSKKRYRDPDAAARAAEQAAQARAERIQQLN KFDQLSKRRKLVLPSPEVQDEEIEKIVKYGSRGEKMKQLYTGPDENDANNFQVSEYKDNLSDQEKENSDHEDASELLRRK LQNLPKPLNNFEIMLPEEEEEQEEEQEQKIQDLDRDGDSNMVEDEGEKEIGIKKLKKEELKKRFESRSEALVKDLPRILP TYLNHLQPLAGNKQENLKILDVIKQQIISDAKEYPIPEYSSVKTDGSLMPILSYEMRQKALSLVEQEVKKNENCDTIIGD LSKKLSDLYTPITELKDKIALKNHCVRQLEKMSSESSEIQERLQKTMGGYLKRQEILGSKMSDAFKALTNLQTDSAKFTE SFNAAKMALDMRVRFLQEDVDYLVSLEQWGQDLYKDYQSELISLENGS
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003677 DNA binding
Cellular Component
None predicted.