Protein

MCA_06298_1

Length
610 amino acids


Gene name: VPS5

Description: Vacuolar protein sorting-associated protein 5

Browser: contigD:3794039-3795872+

RNA-seq: read pairs 4239, FPKM 85.7, percentile rank 76.4% (100% = highest expression)

Protein function

Annotation:VPS5Vacuolar protein sorting-associated protein 5
KEGG:K17917SNX1_2 sorting nexin-1/2
EGGNOG:0PI2ZVPS5vacuolar protein sorting-associated protein vps5
SGD closest match:S000005595VPS5Vacuolar protein sorting-associated protein 5
CGD closest match:CAL0000176726orf19.2867Sorting nexin 1

Protein alignments

%idAln lengthE-value
MIA_06291_162.62%6100.0MIA_06291_1
A0A060T0Q6_BLAAD61.02%4132e-172ARAD1C10230p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C10230g PE=4 SV=1
A0A167CBU5_9ASCO62.47%4056e-165Vps5p OS=Sugiyamaella lignohabitans GN=VPS5 PE=4 SV=1
UniRef50_A0A167CBU562.47%4052e-161Vps5p n=2 Tax=Trichomonascaceae TaxID=410830 RepID=A0A167CBU5_9ASCO
A0A0J9XLL7_GEOCN52.25%5118e-155Similar to Saccharomyces cerevisiae YOR069W VPS5 Structural component of the retromer membrane coat complex OS=Geotrichum candidum GN=BN980_GECA32s01847g PE=4 SV=1
Q6CGR9_YARLI52.71%3875e-127YALI0A16797p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A16797g PE=4 SV=1
A0A1E3PM18_9ASCO51.30%3842e-118Vps5-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_22648 PE=4 SV=1
A0A1E4TCW5_9ASCO51.23%3677e-112Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_11595 PE=4 SV=1
Q5A1F2_CANAL38.77%4723e-87Sorting nexin 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2867 PE=4 SV=1
VPS5_YEAST37.50%4249e-73Vacuolar protein sorting-associated protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VPS5 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1886

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 610

Detailed signature matches

    1. SM00312 (PX_2)
    2. SSF64268 (PX domain)
    1. PF09325 (Vps5)
    1. SSF103657 (BAR/IMD ...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd06861 (PX_Vps5p)
  2. cd07627 (BAR_Vps5p)
  3. mobidb-lite (disord...)

Residue annotation

  1. phosphoinositide b...
  2. dimer interface cd...

Protein sequence

>MCA_06298_1
MVDDELDLAGSHWGDVVSTSSNNEADSNESKPAQENDNDDNSAQSKNKESSATTTSTPSKSKHSRISTLRSSRFNKKSVP
KVHIESVTSSDPLGPLGSSQSDTTSSDSVSAQKTAESERKAYGDKDITTSIKHFNSNNERLALFGNEPSELTSNPFATET
SQNSNQLYNSSVESATAGIAGVSIDDKSSGKPSALNPNAQLNGEQTASLTAASSQPNKSTQLTNTFEVSVGDPIKVGDIT
SAHTVYTVHTKTNSPNFSSSETSVTRRYRDFRWLYHALENNNPGIIIPPPPEKQAVGRFDENFVESRRAALESMINKCVN
HPILQNDPDLRIFLESETFSTDIKSKQYQAQNTSVSGGSESKGFMSSLGGAFSFSGKYVETDEWFIQKKNYVDTLENHFR
YLSKSLESVVTQRNELSDATSEFSIVLNSLSQVELSKSFGELIERFSDVETRIRDLYYRQCMQDVLSLGTTLDEYIRLLT
SIRNVFAQRQKSYFAMQSAEQELTKKRQHLEKVMKQGKTLQDKIAILRDEVVEQEKKVLNARVAFDDISKSIIKEFARFE
ESKASDFRNSIELYLENAVEAQKEAIEIWETFYQLSGFIPVSSDPEATKV

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0035091 phosphatidylinositol binding

Cellular Component

None predicted.