Protein
MCA_06280_1
Length
864 amino acids
Description: Cullin-4 -like protein; ubiquitin ligase subunit
Browser: contigD:3748556-3751209+
RNA-seq: read pairs 1522, FPKM 21.7, percentile rank 43.6% (100% = highest expression)
Protein function
| Annotation: | Cullin-4 -like protein; ubiquitin ligase subunit | ||
|---|---|---|---|
| KEGG: | K10609 | CUL4 | cullin 4 |
| EGGNOG: | 0PGFA | FG05520.1 | ubiquitin ligase subunit CulD |
| SGD closest match: | S000003235 | CUL3 | Cullin-3 |
| CGD closest match: | CAL0000191783 | RTT101 | Cullin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06404_1 | 26.06% | 495 | 9e-37 | MIA_06404_1 |
| UniRef50_F2U0F8 | 29.37% | 286 | 4e-23 | Putative uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U0F8_SALR5 |
| A0A167EDC6_9ASCO | 26.05% | 357 | 3e-23 | Cullin CUL3 OS=Sugiyamaella lignohabitans GN=CUL3 PE=3 SV=1 |
| A0A0J9XCA7_GEOCN | 25.39% | 382 | 2e-19 | Similar to Saccharomyces cerevisiae YGR003W CUL3 Ubiquitin-protein ligase OS=Geotrichum candidum GN=BN980_GECA09s00296g PE=3 SV=1 |
| A0A060TBE1_BLAAD | 24.94% | 409 | 1e-17 | ARAD1D34496p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D34496g PE=3 SV=1 |
| Q6C9B4_YARLI | 24.31% | 325 | 9e-12 | YALI0D12518p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D12518g PE=3 SV=1 |
| CUL3_YEAST | 27.09% | 203 | 1e-10 | Cullin-3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CUL3 PE=1 SV=1 |
| A0A1E3PTF5_9ASCO | 28.82% | 170 | 2e-09 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_39506 PE=3 SV=1 |
| A0A1E4TJE3_9ASCO | 22.40% | 317 | 4e-08 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_78572 PE=3 SV=1 |
| A0A1D8PDR1_CANAL | 31.34% | 201 | 6e-08 | Cullin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RTT101 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1968
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Domain
1
100
200
300
400
500
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864
Detailed signature matches
no IPR
Unintegrated signatures
-
-
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mobidb-lite (disord...)
Protein sequence
>MCA_06280_1 MSVSNKRRKNNYSPDFTIATSRFSHANSGMNRDTDRNHLASYDTSSDSLSSTSSSVSLPLYRAPRHRVITLQNLNKRQKR QIRIIPSEPSTAPPDATTFFIKEQESNIRNFIEAVFSLDRAENVQSSVAIDENTEVIVKMGHIYAQELWKTVADLLKQQI SLLGKQLKDRLKDAANFTFDQAKETLEFFKRVFFLFTSAQKMVSSALSYLDLAYVRIKTGFANGINSYMILEFARYFDDT HFIKDMSLVINIIIQSSLSSTIIDNGLSAQVSQQFESSYHQVMEDYYFLRENLEKISPTASAKMAKILCQLEPSVVISLT SLLNQDEITAQDLVASIHDLVNFFRTRIISESVKPNYLTFSENKIRSMVAEKWKEKLCSNLADYLEESKLSNYEKIFYFF YEDSSRQFFSEKLSADLNLLLRNILTQQISSEVQIERISKIRKNLTKVSEQSFGFISEREKDVLNKMFRSSWNAFICDGD KMDYISKASEAYLDRILKDKSMDPSRVDSIIESVIYLFKYLSTYGKDNFVNRFKTSLNKRLLQDKAYFFEKEEEIINEIG KEMGAEHIESLSSMIADMKISETLSEAFKPKMRLINPKISFAAKILNEKNWPKPRDIEFTLPASLSSIQNSFTKFYKAYE PQNNPEKANYKNRKLTWAPVRHKFLLKVNLNQGAKQIFANTLQATILLLFDESPEDRKYTLSMKDIIQETNIPLPDLEGA LTSLVYGKYNILLRLAPGSLEPIPKSVPYDKDDVYKVNLGLTSSKLRINLNLSIPNETPLGNVRDEGKLDMSLKMEASVV FCMKQNREMTSLELKSKVCEDLVKYVKNENEINLDDLDKIIDKMIEKGYIDRHHSSPSTYVYVP
GO term prediction
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
Molecular Function
GO:0031625 ubiquitin protein ligase binding
Cellular Component
None predicted.