Protein

MCA_06249_1

Length
370 amino acids

Browser: contigD:3677308-3678421-

RNA-seq: read pairs 933, FPKM 31.1, percentile rank 53.7% (100% = highest expression)

Protein function

KEGG:K10847XPA DNA-repair protein complementing XP-A cells
EGGNOG:0PICNFG01666.1DNA repair protein Rad14
SGD closest match:S000004814RAD14DNA repair protein RAD14
CGD closest match:CAL0000195624RAD14DNA repair protein RAD14

Protein alignments

%idAln lengthE-value
MIA_03021_160.00%2502e-102MIA_03021_1
A0A0J9XJS3_GEOCN56.86%2556e-94Similar to Saccharomyces cerevisiae YMR201C RAD14 Protein that recognizes and binds damaged DNA during nucleotide excision repair OS=Geotrichum candidum GN=BN980_GECA25s00835g PE=4 SV=1
UniRef50_A0A0J9XJS356.86%2551e-90Similar to Saccharomyces cerevisiae YMR201C RAD14 Protein that recognizes and binds damaged DNA during nucleotide excision repair n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJS3_GEOCN
A0A1E3PJV9_9ASCO53.36%2386e-79DNA repair protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_70759 PE=4 SV=1
A0A060TAR2_BLAAD52.68%2241e-68ARAD1D21868p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D21868g PE=4 SV=1
A0A1E4TDP0_9ASCO47.46%2367e-65Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1613 PE=4 SV=1
RAD14_CANAL44.87%2632e-62DNA repair protein RAD14 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD14 PE=3 SV=2
Q6CG24_YARLI44.26%2352e-56YALI0B01474p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B01474g PE=4 SV=1
RAD14_YEAST38.43%2556e-48DNA repair protein RAD14 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD14 PE=1 SV=2
A0A167C367_9ASCO51.49%1015e-24Rad14p OS=Sugiyamaella lignohabitans GN=RAD14 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0331

Protein family membership

  • XPA (IPR000465)

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 370

Detailed signature matches

  1. Family IPR000465
    XPA
    1. TIGR00598
  2. Domain IPR009061
    Putative DNA-binding domain
    1. SSF46955 (Putative ...)
  3. Domain IPR022656
    XPA C- terminal
    1. PF05181 (XPA_C)
    2. G3DSA:3.90.53...
  4. SITE IPR022658
    XPA, conserved site
    1. PS00753 (XPA_2)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MCA_06249_1
MSDSNISISGNDDSRKKAMERLRAARLRIARGESGFKRLPVNSNTSPSDNNSSKSKGKRTYEDVDSLNNNPNKIARSDSI
TTPSSTVINNSNNASQPSTSNNTNKNTPQPSTENKSNGDQHRKANRPSAFSKKFDNYIEFDFSKMQDTKGGFLTEESTMT
PEEIAAKRQRELEDRKRELKLGESPVMAGGADALKCFECGTENLDFKLYNVFKCRVCKICARSKPEKYSLLTKTECKEDY
LLTDPELRDTELLPHWDRPNPYKSTFTNMMLYLRYQAEEVAYKKWGGPEQLDAEYQRRVEAKKKKKDKRFVEKLQMLRKR
TKVSGAYANDTKNLHHVHEWSAGLAVTNAPTGTVRRRCATCGMETEEILM

GO term prediction

Biological Process

GO:0006289 nucleotide-excision repair

Molecular Function

GO:0003684 damaged DNA binding

Cellular Component

GO:0005634 nucleus