MCA_06236_1

Browser: contigD:3638343-3639243+

RNA-seq: read pairs 548, FPKM 22.6, percentile rank 44.7% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1074

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   21 - 299

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 20

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   17 - 20

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   5 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 20

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   244 - 269

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06236_1
MKSSIHSLSIISLCIVKALAQQDEQNPDIVLTPSISLVPITADVSPPIASAPLPHYTGPECVPGTESSIISLEAVTYPGT
TITGTADNGETVYAGVAGVTYEATVLTIPPCDTGNVSIPVITTSIPVTQNTTIVIPTTPANTTTTTPTTATTPTGISNST
IITSLIPTTATITSSIHFNSTVTSSDDHGGPITTTVTVCDEEDVCQTTVITHTPEPTDDGGPITTTVTVCDEEDVCQTTV
ITHTPEPTGEETATATVTTTQPTSEPTETETSIQQGGAAQLVQVSSAMNFALIICAFFF

GO term prediction