MCA_06235_1

Browser: contigD:3636100-3636730+

RNA-seq: read pairs 11030, FPKM 649.0, percentile rank 95.3% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1129

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   20 - 209

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 19

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   15 - 19

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   6 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 19

   SignalP euk
   SignalP-noTM (SignalP-noTM)
7. mobidb-lite (disord...)
   95 - 137

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06235_1
MAFKSALTLFVSSLAVASAAGNYTLSSSSSDAVSVITTTITSCEQEVCKTITKTIDCDTTTTTVAPSSTEICETVTVCNN
GACETKTTTVTVCPECEHKSTPSAAPSTEAPKPSSEAPKPSSEAPKPSPKPTTSDEVVVKTKTVTEVCTEEKCKPTTTPV
VVPTPAPSHNATAPPPAVVPPETTLPQVNGASKATFSLVAVVACAFALL

GO term prediction