MCA_06212_1

Browser: contigD:3576812-3577646-

RNA-seq: read pairs 207, FPKM 9.2, percentile rank 24.6% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0438
Predicted cleavage: 73

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   46 - 277

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   1 - 15

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. TMhelix
   15 - 37

   TMHMM
   TMhelix (TMhelix)
4. TRANSMEMBRANE (Tran...)
   16 - 45

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
5. mobidb-lite (disord...)
   247 - 277

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   169 - 235

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06212_1
MTWLPSYSIASTIEQIVVTTCLCLAICCLIPVIAFVCIDISLFIFKICIHNSSQTYISVKRRLSDPNVVSRFNSFTSLST
LSAAKKSPSTFFYNYHHLISPSRSTLKLSSLSSAYSSSTSLFKLNIFDSPTTQTSSSDSVVNQKINNLARRVLSIQPILA
SLANYISSSTTTSKSPETCEKTNISESSINPNSDPTNSNTMITTTSTTATLSKDKPPTIDLVTRDSDEDSDEDNDNYLWL
ENLTPTTSISTNSTRPNSSTSLNNIRESNLIKRSIMT

GO term prediction