MCA_06200_1

Browser: contigD:3518491-3519757-

RNA-seq: read pairs 0, FPKM 0.0, percentile rank 0.8% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9224

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   421 - 421

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. Coil
   305 - 332

   COILS
   Coil (Coil)
3. NON_CYTOPLASM... (N...)
   24 - 401

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
4. SIGNAL_PEPTIDE (Sig...)
   1 - 23

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
5. SIGNAL_PEPTID... (S...)
   17 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
6. SIGNAL_PEPTID... (S...)
   5 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
7. SIGNAL_PEPTID... (S...)
   1 - 4

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
8. SignalP-noTM
   1 - 23

   SignalP euk
   SignalP-noTM (SignalP-noTM)
9. TRANSMEMBRANE (Tran...)
   402 - 420

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    295 - 403

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06200_1
MIYKFVILALAILLSAQSAIASADPLLGLLFKCQTVTQHHPKPKRKTCVAGSVGKQVSFPKIVLPAKTIGGKALKKRTFF
KKCTVTYMPAATFPAYTGYLPPCNPAPGCPNGNCGKPPSCGSGNCGNPPSCGSGNCGGNKPPKPQPKPPCRPQKPICIQY
RIFKGNYCGKWVLYKACSCYGHIGCLAGNGFAKNPLIQYKNKVITGLSSEASKFLLAEGKSNSLVKAKLNSLKTQHKLNI
VDEVTIKKNQLKNTKALADFDILKKKPNLFSKVLIKRAEEITDSEDVAEEVLERDVAAQNDAESVAAEENELQEREDDIE
SVEEEAKVDEAESKVSDEDSEEETEPEATVSDEQDSEAQDLQERDTETVDDEDSVDNEEDSEEQHLEERDNAPRSTNASN
KVDAGLVSVVAISMCLFAAIF

GO term prediction