MCA_06199_1

Browser: contigD:3517097-3517898-

RNA-seq: read pairs 6, FPKM 0.3, percentile rank 5.4% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1072

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   266 - 266

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   18 - 246

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 17

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   14 - 17

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   6 - 13

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 5

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 17

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TRANSMEMBRANE (Tran...)
   247 - 265

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
9. mobidb-lite (disord...)
   125 - 144

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   187 - 210

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_06199_1
MILTKILIFTFVFAAAAIFIPPKWKNAPPPVNQNRIQNPEFLNYVGTNYKIVADNVGLKLDNPLASNYFASRSKVFIEQV
SKAIVTLTNFGSSEQSMMNSLFRSEASRFEQAASTIQRISLANTRRPTGNSIESPEFPEFSEDSEPIRFTRSNTVGRSFY
FTNTLTTTPTITRSARTYSYSYRSETTDESTGTYSFESTSTTERTTQMSSLTTNSFTSFLYPQRDETTTSRSRSTSSSNS
IYNSGRAMKAVTSTILIIFVILVYLL

GO term prediction