MCA_06193_1

Browser: contigD:3503048-3503591+

RNA-seq: read pairs 54, FPKM 3.7, percentile rank 15.2% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0225

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   22 - 180

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 21

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   15 - 21

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   3 - 14

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-noTM
   1 - 21

   SignalP euk
   SignalP-noTM (SignalP-noTM)

Protein sequence

>MCA_06193_1
MQFTSITLAFAALLSANSVLASIDNNGKFFDCQTAYIAQSTPRPPPCHNGKETMTKVYPATHLKEIRNTRGITEKGKDYG
VCTVVIYPETSYPAVTATVTPCAQPKVAAFRMAAAPELVTKTVDATRPLKTSCVTRGARRLHVLPAVDVKPKTVTGKDNT
VTVHRGKYFQRATTILPYCK

GO term prediction