Protein
MCA_06178_1
Length
312 amino acids
Gene name: NOP6
Description: Nucleolar protein 6
Browser: contigD:3464970-3465909+
RNA-seq: read pairs 839, FPKM 33.1, percentile rank 55.4% (100% = highest expression)
Protein function
| Annotation: | NOP6 | Nucleolar protein 6 | |
|---|---|---|---|
| KEGG: | K14789 | NOP6 | nucleolar protein 6 |
| EGGNOG: | 0PNUB | PGUG_04859 | RNA binding protein |
| SGD closest match: | S000002372 | NOP6 | Nucleolar protein 6 |
| CGD closest match: | CAL0000191755 | NOP6 | Nop6p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06407_1 | 57.14% | 161 | 3e-52 | MIA_06407_1 |
| UniRef50_A0A1E4T5S5 | 49.06% | 159 | 3e-35 | Uncharacterized protein n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E4T5S5_9ASCO |
| Q6C4L0_YARLI | 45.78% | 166 | 2e-35 | YALI0E25872p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E25872g PE=4 SV=1 |
| A0A0J9XIB8_GEOCN | 43.53% | 170 | 7e-35 | Similar to Saccharomyces cerevisiae YDL213C NOP6 rRNA-binding protein required for 40S ribosomal subunit biogenesis OS=Geotrichum candidum GN=BN980_GECA20s00417g PE=4 SV=1 |
| A0A167F9V2_9ASCO | 44.65% | 159 | 1e-33 | Nop6p OS=Sugiyamaella lignohabitans GN=NOP6 PE=4 SV=1 |
| A0A1E3PDJ7_9ASCO | 54.46% | 101 | 8e-33 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_6261 PE=4 SV=1 |
| Q5AAS4_CANAL | 42.14% | 159 | 7e-32 | Nop6p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NOP6 PE=4 SV=1 |
| A0A060THV9_BLAAD | 53.61% | 97 | 6e-31 | ARAD1D34430p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D34430g PE=4 SV=1 |
| A0A1E4TBJ2_9ASCO | 50.00% | 106 | 6e-29 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_14824 PE=4 SV=1 |
| NOP6_YEAST | 38.51% | 161 | 4e-23 | Nucleolar protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOP6 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0872
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
312
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_06178_1 MSESKTEISVTEQNTESKQQNTEEKKLSKKERKALEFREKLESKKLSKQQKQEDPEKRIKEKEEKKEERKESKKLKRKAI DEAEAAKNENTKQSEPSADSTPATTGSKKKKRRKSKAKKEGESANRFLLFVGNLPFNYEQSELEAHFTKAKPDVIRGRLK SGFAFLEFKGDDASQRLVTALKFHHSEFKGRKINVELTAGGGGNSDLRREKIREKNEKLEQQRKAEIEKENELKAQRKHI KFDDKKEGESVDAKPKDTEESNTSVPEEDDVSGIHPSRRRLITDESKKKKASKWKGQKSVENFNSNSSNRNF
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.