Protein
MCA_06173_1
Length
1,339 amino acids
Gene name: JSN1
Description: Protein JSN1
Browser: contigD:3448308-3452577+
RNA-seq: read pairs 3100, FPKM 28.6, percentile rank 51.3% (100% = highest expression)
Protein function
| Annotation: | JSN1 | Protein JSN1 | |
|---|---|---|---|
| KEGG: | K17974 | JSN1 | protein JSN1 |
| EGGNOG: | 0PFWH | PGUG_03079 | RNA binding protein |
| SGD closest match: | S000003851 | JSN1 | Protein JSN1 |
| CGD closest match: | CAL0000199233 | orf19.4262 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XBF5_GEOCN | 59.02% | 820 | 0.0 | Similar to Saccharomyces cerevisiae YJR091C JSN1 Member of the Puf family of RNA-binding proteins OS=Geotrichum candidum GN=BN980_GECA08s02072g PE=4 SV=1 |
| UniRef50_A0A0J9XBF5 | 59.02% | 820 | 0.0 | Similar to Saccharomyces cerevisiae YJR091C JSN1 Member of the Puf family of RNA-binding proteins n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBF5_GEOCN |
| MIA_06393_1 | 72.38% | 601 | 0.0 | MIA_06393_1 |
| A0A060T7G7_BLAAD | 61.67% | 587 | 0.0 | ARAD1B18854p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B18854g PE=4 SV=1 |
| A0A167EQ57_9ASCO | 61.88% | 543 | 0.0 | Puf2p OS=Sugiyamaella lignohabitans GN=PUF2 PE=4 SV=1 |
| Q6CGG0_YARLI | 47.98% | 519 | 4e-124 | YALI0A19668p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A19668g PE=4 SV=1 |
| A0A1E3PPT2_9ASCO | 40.61% | 628 | 4e-110 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49681 PE=4 SV=1 |
| JSN1_YEAST | 47.48% | 377 | 1e-89 | Protein JSN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=JSN1 PE=1 SV=1 |
| A0A1D8PNF9_CANAL | 45.18% | 301 | 7e-64 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4262 PE=4 SV=1 |
| A0A1E4TI68_9ASCO | 39.72% | 282 | 6e-61 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_16130 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0721
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1200
1339
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd00590 (RRM_SF)
-
mobidb-lite (disord...)
Protein sequence
>MCA_06173_1 MNLSDSVAGAGSPFDYSTQSRELYSSNQSSIFPTTTTTTTNNNSTTPSTPFTPSTSATSSYFSTTHHHSSTPSLNLDNQT TAFNQEYKLPSQHVLQQFNQMQQQSQSQAHPQSQLQPQQSLTQKQSQPQLAPGSSRSRARAGTLPSRLPPGIVPLSSSSS SLLSTSESVSPSSSHLFTSSGPASSRIIQQSNSSSLLQQQQQAQQAQHQQQQNYQSRLQAFGVNSQASSSASSLLLSNDH SDSYRTEIPFTTPSSNSGNTPSSISSSSPSSSSSSINQVSRLRSGSLNILSDSSRPPSIFPSLVSSIWSQRSPLPSSSPE VKISSTQPSSLYNSTEDMNLEERNSLLSRKPSQKSIRQSSPVRILDQMPNQSSSHMHSQNLDPQTIDPLQPFYKELTMRT DPSRMRSYTVNNLPYGLPSYDLMSASEPSSREQDNQQQSMHQYSQQQQQQQQQQQQQQQQHQLHQQGQIQSQSDMPQMLQ QSQHNSGIQSQVSNRQSFISGGHRPRAQTAASAFDPPLSIGNIPVLKTPQLQSQSSIVYSAQDPVTHHDIIVNTLDDASL GPSRSLWIGNIPGSTTSYALQAIFSSYGTVESARVLTHKNCGFVNFVNIESAVQAKEVLDGMEIFTGAGPCRVSFANFHS NGMDSDDKNEIEFPQLKPQPQNSQNISSTSPTSKNEELANNANVEYSVTDKENTIESSVLEPAKSLHEISEELVKIVSEL GADTSEQTKISSAIKRALEFTDFKKDIGSVPEPRPDRVYDAPTLREVRKKIDSGSCSLEEIEDIALDILDEIAELSSDYV GNTVVQKLFDSCSEPIKDMMLKQIAPYLSQICIHKNGTWAAQRIIAVAGTTRQINTIVESLHPYTVHLFLDQFGNYAIQC VLKFGNPWNDFIFETMLSKFWEIAQGRFGARAMRACLESHYVSKEQQRMIAAAIAMHAVQLATNANGALLLTWFLDTYSA PNRHTILAPMLIPHIVQLGTHKLASVTVLKVVNCRSEPGARQAIFNTLFEPQEEAPNAVLEQILNHPYGSTFIFKILSTP FLEGQERQNAVNKIRTVLISIKALPSQGYKRLMDEVGLATKTTNSPNAGNINNNVNALNGNRGISSMGQNNNGINRGYQQ YQIRGGPNQHRQRQGYNSNMPIQPPGINNYYQPSMMGPMQMMPQQQQPQQSPFNNNRPQYNTNPNGNTNNPQQPNSNLNN NPNKSLYGMGNDIMYSQYPYSSEMSGIMPAPGMPPQGSYDINMVQQQFGKMNMSMNNAPMGNPPMQVMNGNSTANMMNGP SPNMNTVIPSGDRSSIGHGSYPGNGQQQGYGMMGMMNNDNGQQQSYMSDIRMNGLYPGQ
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0005488 binding
GO:0005515 protein binding
Cellular Component
None predicted.