Protein
MCA_06158_1
Length
758 amino acids
Gene name: SEC23B
Description: Protein transport protein SEC23
Browser: contigD:3398873-3401333-
RNA-seq: read pairs 4331, FPKM 70.5, percentile rank 72.8% (100% = highest expression)
Protein function
| Annotation: | SEC23B | Protein transport protein SEC23 | |
|---|---|---|---|
| KEGG: | K14006 | SEC23 | protein transport protein SEC23 |
| EGGNOG: | 0PGI6 | SEC23 | Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules (By similarity) |
| SGD closest match: | S000006385 | SEC23 | Protein transport protein SEC23 |
| CGD closest match: | CAL0000192101 | SEC23 | Protein transport protein SEC23 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00754_1 | 69.38% | 761 | 0.0 | MIA_00754_1 |
| A0A0J9XGU3_GEOCN | 66.58% | 757 | 0.0 | Similar to Saccharomyces cerevisiae YPR181C SEC23 GTPase-activating protein, stimulates the GTPase activity of Sar1p OS=Geotrichum candidum GN=BN980_GECA13s03607g PE=4 SV=1 |
| A0A1E3PFR6_9ASCO | 55.97% | 754 | 0.0 | Protein transport protein SEC23 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83797 PE=4 SV=1 |
| A0A060T3C0_BLAAD | 54.57% | 755 | 0.0 | ARAD1C36102p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C36102g PE=4 SV=1 |
| UniRef50_A0A0G4MUQ3 | 53.35% | 761 | 0.0 | Uncharacterized protein n=1 Tax=Verticillium longisporum TaxID=100787 RepID=A0A0G4MUQ3_9PEZI |
| SEC23_YARLI | 52.68% | 746 | 0.0 | Protein transport protein SEC23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SEC23 PE=3 SV=2 |
| SEC23_CANAL | 52.33% | 751 | 0.0 | Protein transport protein SEC23 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SEC23 PE=3 SV=2 |
| SEC23_YEAST | 50.26% | 764 | 0.0 | Protein transport protein SEC23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC23 PE=1 SV=1 |
| A0A1E4TJX3_9ASCO | 50.93% | 756 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_47375 PE=4 SV=1 |
| A0A170QYY7_9ASCO | 56.84% | 607 | 0.0 | GTPase-activating protein SEC23 OS=Sugiyamaella lignohabitans GN=SEC23 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1176
Protein family membership
None predicted.
Domains and repeats
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Domain
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Domain
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Domain
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758
Detailed signature matches
no IPR
Unintegrated signatures
-
-
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SSF81995 (beta-sand...)
Protein sequence
>MCA_06158_1 MVWKLKKKTTEAKSSVIPVGVMYKPLFEKPELTVLEYDPLVCRNDNCRAILNPYCMIDPSTHVWICRLCLQRNNLPKNYV ITRETLPPEIQPTNTTVEYVLNRTSNAPPVFFYVVDVCQYQENFQALKDALLVSISLLPPTALIGLISFGTNVQLHELGF NETFKTIAFNGKKNYSSKEIQETLGFISADLRTAAGGRPAAPPASALETASRYLLPIQEAEFFLTNTLEQLMLDTFSVDK QNRPLRSTGVALNVAISLLETAFPNTGSRVMLFAAGPCTKGPGLVVSQPFSEAIRSHHDIEEDHVPHYKAACLYYESLAK RASRNGAVVDIFAGSYDQIGLDEMKSLPHYTGGVIVLADAFTTSIFKQSFLRVFNKSEDGFLQMGLSGNLEVKLSKELKV SGLIGHAIGQDNKNGYVAETAVGIGGTSSWKLCGIMPQSTYAIYFDVVNTKSPTLHANEQPPQAFIQFITYYQHASGGFR LRVTTVGRGLSLPGQIEALKASFDQEAAACLVARLAVYKTAIQNEPIAEVVRWLDFLLIRLCSHFGEYVKDDPSTFRLIP QIGYHFPQFMYHLRRSQFLQVFNNSPDETAYYRHVLLTEDTNNSTLMIQPSLTAYEIDNPTEGMPVLLDSTSLAPERILL LDTFFHILIYHGETIAAWRKAGYQDQEDYANFRLMLEQPRKDASELLIDRFPLPRFIDTEAKGSQARFLMARLNPSRSVA NTGSFFEGSNIVLTDDVSLQDFMDYLIKVCVSSKKPSF
GO term prediction
Biological Process
GO:0006886 intracellular protein transport
GO:0006888 ER to Golgi vesicle-mediated transport
Molecular Function
GO:0008270 zinc ion binding
Cellular Component
GO:0030127 COPII vesicle coat