Protein

MCA_06154_1

Length
540 amino acids

Gene name: SRP1

Description: Importin subunit alpha

Browser: contigD:3390696-3392553-

RNA-seq: read pairs 14228, FPKM 325.0, percentile rank 92.3% (100% = highest expression)

Protein function

Annotation:SRP1Importin subunit alpha
EGGNOG:0PI6QSRP1importin subunit alpha
SGD closest match:S000005133SRP1Importin subunit alpha
CGD closest match:CAL0000179212orf19.5682Importin subunit alpha

Protein alignments

%idAln lengthE-value
MIA_00758_170.53%5430.0MIA_00758_1
A0A060T5K5_BLAAD68.52%5400.0Importin subunit alpha OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B07370g PE=3 SV=1
A0A161HFL1_9ASCO68.56%5280.0Importin subunit alpha OS=Sugiyamaella lignohabitans GN=SRP1 PE=3 SV=1
UniRef50_A0A161HFL168.56%5280.0Importin subunit alpha n=3 Tax=Eukaryota TaxID=2759 RepID=A0A161HFL1_9ASCO
A0A1E3PSH6_9ASCO67.03%5430.0Importin subunit alpha OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_20646 PE=3 SV=1
A0A0J9X2Q1_GEOCN68.93%5310.0Importin subunit alpha OS=Geotrichum candidum GN=BN980_GECA01s04740g PE=3 SV=1
Q6C019_YARLI66.17%5350.0Importin subunit alpha OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F28501g PE=3 SV=1
A0A1D8PMU8_CANAL61.57%5360.0Importin subunit alpha OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5682 PE=3 SV=1
A0A1E4TJI7_9ASCO61.76%5440.0Importin subunit alpha OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_78949 PE=3 SV=1
IMA1_YEAST60.70%5420.0Importin subunit alpha OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SRP1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1317

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
1 50 100 150 200 250 300 350 400 450 500 540

Detailed signature matches

  1. Family IPR024931
    Importin subunit alpha
    1. PIRSF005673 (Import...)
  2. Domain IPR002652
    Importin-alpha, importin-beta-binding domain
    1. PS51214 (IBB)
    2. PF01749 (IBB)
  3. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  4. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  5. Repeat IPR000225
    Armadillo
    1. SM00185 (arm_5)
    2. PS50176 (ARM_REPEAT)
    3. PF00514 (Arm)
  6. Repeat IPR032413
    Atypical Arm repeat
    1. PF16186 (Arm_3)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil

Protein sequence

>MCA_06154_1
MDSDATSRFIPEHRRTTFKNRGLFQADELRRRREEAQVEIRKQKRDENLAKRRNLMEVSLASDSEDEQDDIDATEVAIQN
DFPILLEQLDSNDIEKQLDATQKIRKLLSKERNPPIDQVIQANVVPKFVEFLDSNHNLLQFEAAWAVTNIASGTTEQTKV
VVESGAIPKFVKLLESDAEDVKEQAVWALGNIAGDSPAFRDLVLNAGALPPLLAILNETGKLPVIRNATWTLSNFCRGKN
PQPDWNIISQALPILSKLIYSFDDEILIDACWAISYLSDGTNDKIQAVIDSGIPRKLVELLQHPSTAVQTPALRSVGNIV
TGDDVQTQVMINAGVLTSLLSLLGTPRDSIRKETCWTISNITAGNSDQIQEVIEANIIPPLIQLLANSDFKTKKEACWAI
SNATSGGLSRPSIIRYLVNQGCIKPLCDLLVSGDNKIIQVALDGLENILKIGEMDKQQNNLPANQYALHIESAGGLEKIH
DCQNNENDQIYRKAYNIIETYFNDDDEYAEDENLAVAPEAQGDTYTFGTGNNTQQTPFSF

GO term prediction

Biological Process

GO:0006606 protein import into nucleus

Molecular Function

GO:0005488 binding
GO:0005515 protein binding
GO:0008565 protein transporter activity

Cellular Component

GO:0005634 nucleus
GO:0005737 cytoplasm