Protein
MCA_06146_1
Length
752 amino acids
Description: Protein with pentatricopeptide repeats and tetratricopeptide-like helical domain
Browser: contigD:3360355-3362614+
RNA-seq: read pairs 4609, FPKM 75.6, percentile rank 74.2% (100% = highest expression)
Protein function
| Annotation: | Protein with pentatricopeptide repeats and tetratricopeptide-like helical domain | ||
|---|---|---|---|
| EGGNOG: | 0PKEY | Inherit from KOG: Pentatricopeptide repeat-containing protein | |
| CGD closest match: | CAL0000194004 | orf19.1956 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06110_1 | 44.24% | 642 | 0.0 | MIA_06110_1 |
| A0A0J9XEF7_GEOCN | 42.56% | 632 | 3e-179 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA10s02430g PE=4 SV=1 |
| UniRef50_A0A0J9XEF7 | 42.56% | 632 | 5e-176 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XEF7_GEOCN |
| A0A060TGM4_BLAAD | 35.55% | 616 | 1e-129 | ARAD1D31834p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D31834g PE=4 SV=1 |
| A0A161HH26_9ASCO | 33.76% | 625 | 6e-110 | Pentatricopeptide repeat-containing protein OS=Sugiyamaella lignohabitans GN=AWJ20_4070 PE=4 SV=1 |
| A0A1E3PR57_9ASCO | 27.53% | 592 | 2e-66 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49760 PE=4 SV=1 |
| A0A1E4TF22_9ASCO | 24.53% | 477 | 2e-35 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2038 PE=4 SV=1 |
| A0A1D8PN34_CANAL | 22.88% | 507 | 1e-22 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1956 PE=4 SV=1 |
| CCM1_YARLI | 25.60% | 168 | 3e-06 | Mitochondrial group I intron splicing factor CCM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCM1 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9973
Predicted cleavage: 40
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
752
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_06146_1 MLHYSSSRILLQTARLRSSAFLARNVKIARPFAMSALRLNSTLRADENQPQDTAIKSDADSFFSEAKLEEAKGFLENETE IAQKAENVRDVSTSQYLQRNRGHGRRNDRPFFPPEYREQVFNAYAEVNRLLEEGNLVKATKLFEETYRPEEAVLFASFKT PDNKKLSLHLFQKVSEAFKRSSPPEGLITPSALFKLYLQGNFILGWMCADAIMYEVSRGNQQEGLEVWVQFLEQKGDVTK AVRVENREAAIAALTAYITQCLADGSEISTEIASELIPVKSIPEQYDIQRFYRTTNFKIDADLARTVEKEIAKLRFTKLD PTNPDFLDDLPIGQVSELESRYKDVLDKAEKENITLPESVYNRFMFCFAESGRPDRALDIWSKYLAAGFVPTVHLWNTLL KAIILTKKQDVAVLEALIVKMKDSGVEPDSNTYGTLIDAYFKAKTPWTGIEIFEKIRSKAIDVPLNLYILNVTINGLLNN NMEPEAYKLLIEGIENGYIADVIAFNTFISTYIRYKKFNKIDNILKLMEQNNITPNIATYTNLIDSVYKNSSIRNVDPKP YVDALIKEMEAKGIRLNINAITAIIDGMAKSGNGHESNMAMYKLIQQKRLRPNIRTYTSLINGEFISGNTETAEYFFREI KFNGITRNTSSYNQMIRAFGERGNVDKAYQYFKELLKEKNLRPNIYTYYFMLSASAKTIDFRHAQDVLNVLSKEPSDFKV GRVLPSVLRQLRKNKKLVVPVFESENYGRRQE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.