Protein
MCA_06124_1
Length
1,232 amino acids
Gene name: GDE1
Description: Glycerophosphocholine phosphodiesterase GDE1
Browser: contigD:3308533-3312578+
RNA-seq: read pairs 1193, FPKM 12.0, percentile rank 29.1% (100% = highest expression)
Protein function
| Annotation: | GDE1 | Glycerophosphocholine phosphodiesterase GDE1 | |
|---|---|---|---|
| KEGG: | K18696 | GDE1 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| EGGNOG: | 0PGMV | GDE1 | phosphodiesterase gde1 |
| SGD closest match: | S000006031 | GDE1 | Glycerophosphocholine phosphodiesterase GDE1 |
| CGD closest match: | CAL0000191313 | GDE1 | Glycerophosphocholine phosphodiesterase GDE1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00753_1 | 59.67% | 1220 | 0.0 | MIA_00753_1 |
| A0A0J9XHN2_GEOCN | 56.40% | 1227 | 0.0 | Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase OS=Geotrichum candidum GN=BN980_GECA17s00307g PE=4 SV=1 |
| UniRef50_A0A0J9XHN2 | 56.40% | 1227 | 0.0 | Similar to Saccharomyces cerevisiae YPL110C GDE1 Glycerophosphocholine (GroPCho) phosphodiesterase n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHN2_GEOCN |
| A0A161HGY6_9ASCO | 50.04% | 1141 | 0.0 | Gde1p OS=Sugiyamaella lignohabitans GN=GDE1 PE=4 SV=1 |
| A0A060T9J3_BLAAD | 47.98% | 1238 | 0.0 | ARAD1D12364p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D12364g PE=4 SV=1 |
| GDE1_CANAL | 39.54% | 1267 | 0.0 | Glycerophosphocholine phosphodiesterase GDE1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=GDE1 PE=2 SV=1 |
| GDE1_YEAST | 37.99% | 1295 | 0.0 | Glycerophosphocholine phosphodiesterase GDE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GDE1 PE=1 SV=1 |
| Q6C3R1_YARLI | 38.90% | 851 | 0.0 | YALI0E32791p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E32791g PE=4 SV=1 |
| A0A1E3PQD9_9ASCO | 53.98% | 528 | 6e-176 | GDPD-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_69408 PE=4 SV=1 |
| A0A1E4TBC9_9ASCO | 27.95% | 161 | 6e-06 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_133363 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0664
Predicted cleavage: 11
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1232
Detailed signature matches
no IPR
Unintegrated signatures
-
cd14484 (SPX_GDE1_like)
-
mobidb-lite (disord...)
Protein sequence
>MCA_06124_1 MKFGKNLARNQVPEWSNHYLNYKELKKLIKQLQYTQEKTGKTASDNELAPFFFALDRNIELVDEFFNIKFAEYSRRLTLL IEKYNPTTLKERELDPEELEDLLNIMLELRSLFRNLQWYAEVNKRGFVKILKKLDKKIHVNAQSRYLNSKVLVLPFANAS SVDSKLALINTFIDELTPLSADDSGNVDPNLLHSNTEKIINGPVNLQAKSELQKISAQSSSLALPDTALILRQFLNNDDS IHLQQTIENQKPSNEVLLIVLYKAVPLKALSCIKVLLSHIKSFEDPTDLNGRSLFHRIVINHARQRTNGKNSENTTNNNA GALSPANSSGFNTPNSQKQYNRSLYLNPAVLPAASANLSSAFGTDGSNSNDDSDILAFILDNTPENLRHYLVASDTFKRT PLHYSSQHGLKLLTKVIIEYTQKWDLVDSILGFAGSSWKDTEGFTPIQLSVKGNHPLTTEVILSAMNKQQISQIPDLLHI ATRLGSPKLISLLLDAGYDVNKIADPTTNETALYVSAKLNLPEIAELLIKGGADTEIAESTYGWTPLFVASVEGYKDIVK LLIDNGSIIDKADSSGWTPAEHTCLRGHLDILDLLQPKTPPTDAPKLFLNDLKMVNGSDTSLSTMGANSFNSDVLGSSPT STMSSSPESISFARGSPERSLSPVSMMNLSNEPPVKTFGHRYLKDSSMVLVNLGSMDIRETEPPIQLDRVPYSKASSTQL DTALSLIISVKNSEGEPIVIDLPINEGQTMDQYSFYTSSPETAMICFDLVPTYSGSKNKILGRAVGLLSQLTNKIGEHKV SLHRTITLPIIETQTLEILGKIRFQFLIVNPFHHPSLGVVKSSSYWKSLITTRVIGHRGLGKNSLSTKSLQLGENTLQSF IAAANLGASYVEFDVQLTKDYVPVIYHDFLVGETGIDIPMQSLTLEQFLNISDLQKQSDGRNMYHLKSSQDTDSKNKIKP SSIDDLPAVTLRSKEKNRSMSMYDTGSPFESALDRRMKYTRDFKLRGFKANTRGHSIQAPFTTLEEVLKTLPKNVGFNIE CKYPMLDESQAEDMDNLAIELNFWVDTVLKTVYDHAQGRDIIFSSFHPEICIMLSMKQPSIPVLFLTEAGTAPMMDVRAT SLQEAIRLARRWDLLGIVSECTPLIRCPRLIRAVKDSGIVCVTYGAMNNDPSNARLQMKYGVDAVIVDSVLAVRKGLTEP EPESTSESENSKVTTVVNGEASTSKQKEITSA
GO term prediction
Biological Process
GO:0006629 lipid metabolic process
Molecular Function
GO:0005515 protein binding
GO:0008081 phosphoric diester hydrolase activity
Cellular Component
None predicted.