Protein
MCA_06096_1
Length
1,224 amino acids
Browser: contigD:3236369-3240044-
RNA-seq: read pairs 5246, FPKM 52.9, percentile rank 66.5% (100% = highest expression)
Protein function
| KEGG: | K14297 | NUP98 | nuclear pore complex protein Nup98-Nup96 |
|---|---|---|---|
| EGGNOG: | 0PFHY | FGSG_08487 | nucleoporin |
| SGD closest match: | S000004650 | NUP116 | Nucleoporin NUP116/NSP116 |
| CGD closest match: | CAL0000196266 | orf19.7433 | FG-nucleoporin |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03663_1 | 47.51% | 181 | 1e-39 | MIA_03663_1 |
| A0A0J9X4K2_GEOCN | 38.34% | 193 | 8e-37 | Similar to Saccharomyces cerevisiae YMR047C NUP116 FG-nucleoporin component of central core of the nuclear pore complex (NPC) OS=Geotrichum candidum GN=BN980_GECA02s05730g PE=4 SV=1 |
| UniRef50_A0A0J9X4K2 | 38.34% | 193 | 2e-33 | Similar to Saccharomyces cerevisiae YMR047C NUP116 FG-nucleoporin component of central core of the nuclear pore complex (NPC) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X4K2_GEOCN |
| A0A161HFC8_9ASCO | 42.37% | 177 | 4e-35 | FG-nucleoporin NUP116 OS=Sugiyamaella lignohabitans GN=NUP116 PE=4 SV=1 |
| Q6C029_YARLI | 29.04% | 520 | 1e-33 | YALI0F28281p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F28281g PE=4 SV=1 |
| A0A060SYB1_BLAAD | 37.36% | 182 | 1e-30 | ARAD1A19580p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A19580g PE=4 SV=1 |
| A0A1E3PTA5_9ASCO | 33.92% | 171 | 4e-24 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_68720 PE=4 SV=1 |
| A0A1D8PKH4_CANAL | 35.93% | 167 | 1e-22 | FG-nucleoporin OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7433 PE=4 SV=1 |
| NU116_YEAST | 33.91% | 174 | 1e-22 | Nucleoporin NUP116/NSP116 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NUP116 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2064
Predicted cleavage: 18
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
200
400
600
800
1000
1224
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_06096_1 MFGSNNSGSGGFAFGRSSSTTGSSMFGNNNNTSSSPFGSNTTTTTSPFGASSNNNTSSSPFGNSSGNFGQNTSSSPNNSF SSFSSPSANTFGSSSTNTAGSLFGSNKPATSSTGFSFGSSTNSTSTNARPNFEPYVEKDATGTTSFQTITAMPAYRNMST EELRFEDYKNNRKTPSNTSTFGSSTSSPFGAGTSSTTSPFSAFGNNNNTTTTNTSGLFGSNNNNNNTSGSMFGGFGSNAN NSSSTSSGFGGFGSNNNTSTTSAFGGSGFGSSNNTGSAFGGFSNNNNTTSTGSSLFGNNNSTQNKGFSFGSTSGSAFGAN TNNTSTGSSLFGNNNNTGSSLFGSNNNSTNTSSPFGGLNNNTNTNTSSGFGFGSSNTGSSPFGANNNSGSAFGMGNNNNN SGSSLFGANKPAFGSTANTGGSLFGSNNNTNTGSSLFGGANKPAFGSGTTGTSAFGANNNTSTSGGLFGSKPAGGGLFGN NNTSTTTGGGLFGSNNNTNTSGGLFGNNNNNSTSTGGFGFGANNNNNTTGGGLFGSNNTSTTTNTGGGLFGNNNANKPLL GNNTSTSLNTGFGSTPKPLFGGTSTTNTNTGGGLFGGLNSNNNTSTGGGLFGNKPASGGLFGNNNTSTTTGGGLFGSNNN NTTGGGLFGNNNNNNTLGGGLFGNNNNNNSTGGGLFGNNNSLNNNTAANPLLGSVSQGPVGQNMGLGNNQPLVATVDQNP YGNNPLFQPNNLTISNGTIVSPGPLATPISSTEKPKKHNAVSAFKLSPKPLFSNARKYPTKAQSVVKSGSFSGGSNDSLL SGPSPAITSSSGDLVEKKLIRAESFGSTTSVNSLPPASPGNTLFGARADEVILSSTAFSPHHSIRRLIIDRNNPSSSAIE DSPKLLITGGDANDSQDFAANSTTNGNITSNSASSLPNTPTPATLNGSGKIPARQELFSTPAKSPAADNSIFGKSPAGEP FLNGKAGSTTTSAFGFGGVPNSSPKAEEKTPKKSLFLSQDTSSPEKKQRSEESAEKAAGEQKEEEQQQQQPKEEEEQEEK IDESKIPDEEYLNEDGYWMSPSAPKLAKLSLHDLRHVKNFTVGRKGFGKIEFLEPVDLTPIISAASKNKKNNSSSGTQNN NNRFIMDDICGKIVVLMNKSASVYPPEFREGNPPPPPGSELNVRAKVQLENVWPLSRDKKLPIKDFNHPLVRRHIARLKG LPNMTFVDFTEDGTWIFLADPLTS
GO term prediction
Biological Process
GO:0006810 transport
Molecular Function
None predicted.
Cellular Component
GO:0005643 nuclear pore