Protein

MCA_06074_1

Length
204 amino acids

Browser: contigD:3172635-3174202+

RNA-seq: read pairs 2659, FPKM 160.3, percentile rank 85.6% (100% = highest expression)

Protein function

KEGG:K07893RAB6A Ras-related protein Rab-6A
EGGNOG:0PI1PPGUG_05570GTP-binding protein
SGD closest match:S000004252YPT6GTP-binding protein YPT6
CGD closest match:CAL0000189481CAALFM_CR06520CARab family GTPase

Protein alignments

%idAln lengthE-value
MIA_05799_184.80%2044e-125MIA_05799_1
A0A060T4Y8_BLAAD78.43%2045e-117ARAD1C45540p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C45540g PE=4 SV=1
A0A0J9X991_GEOCN76.21%2064e-112Similar to Saccharomyces cerevisiae YLR262C YPT6 Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway OS=Geotrichum candidum GN=BN980_GECA05s00659g PE=4 SV=1
A0A1E3PR62_9ASCO69.27%2052e-100Ras-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48447 PE=4 SV=1
UniRef50_I1GU8665.02%2038e-96Uncharacterized protein n=266 Tax=Eukaryota TaxID=2759 RepID=I1GU86_BRADI
A0A1E4TDW3_9ASCO68.18%1981e-96Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_98731 PE=4 SV=1
Q6CDQ3_YARLI62.63%1982e-92YALI0B22154p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B22154g PE=4 SV=1
YPT6_YEAST62.50%2004e-86GTP-binding protein YPT6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YPT6 PE=1 SV=1
A0A167CHZ1_9ASCO66.47%1737e-79Rab family GTPase YPT6 OS=Sugiyamaella lignohabitans GN=YPT6 PE=4 SV=1
A0A1D8PT80_CANAL55.09%2161e-77Rab family GTPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR06520CA PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0090

Protein family membership

Domains and repeats

  1. Domain
1 20 40 60 80 100 120 140 160 180 204

Detailed signature matches

  1. Family IPR001806
    Small GTPase superfamily
    1. PF00071 (Ras)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR005225
    Small GTP-binding protein domain
    1. TIGR00231
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. G3DSA:3.40.50...
  3. PR00449 (RASTRNSFRMNG)
  4. PS51419 (RAB)
  5. SM00173 (ras_sub_4)
  6. SM00174 (rho_sub_3)
  7. SM00175 (rab_sub_5)
  8. SM00176 (ran_sub_2)
  9. cd01861 (Rab6)

Residue annotation

  1. Rab subfamily moti...
  2. G1 box cd01861
  3. GTP/Mg2+ binding s...
  4. Rab subfamily moti...
  5. Switch I region cd...
  6. putative GEF inter...
  7. G2 box cd01861
  8. Rab family motif 1...
  9. putative GDI inter...
  10. putative effector ...
  11. Rab family motif 2...
  12. G3 box cd01861
  13. Switch II region c...
  14. Rab family motif 3...
  15. Rab family motif 4...
  16. Rab family motif 5...
  17. Rab subfamily moti...
  18. G4 box cd01861
  19. G5 box cd01861
  20. Rab subfamily moti...

Protein sequence

>MCA_06074_1
MSERNDAVEKYKLVLLGEQSVGKTSLLSRFMYDSFDSQYKATIGIDFMSKTMYLPDRTIRLQLWDTAGQERFRTLIPSYI
RDSHVAMVVYDITNRQTFLDAFRWIDDVRTERGDQVIIVLVGNKTDLRDQRQVTVEEGEKKAKELGVLFMETSAKAGMNV
KALFKKVAAELPGLEHNKPEETELIDVSIDAKSRAQPATEGCSC

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003924 GTPase activity
GO:0005525 GTP binding

Cellular Component

None predicted.