Protein
MCA_06053_1
Length
661 amino acids
Browser: contigD:3124036-3126022+
RNA-seq: read pairs 1250, FPKM 23.3, percentile rank 45.6% (100% = highest expression)
Protein function
| KEGG: | K12843 | PRPF3 | U4/U6 small nuclear ribonucleoprotein PRP3 |
|---|---|---|---|
| EGGNOG: | 0PFS0 | FG04292.1 | u4 u6 small nuclear ribonucleoprotein |
| SGD closest match: | S000002881 | PRP3 | U4/U6 small nuclear ribonucleoprotein PRP3 |
| CGD closest match: | CAL0000177949 | PRP3 | U4/U6-U5 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03381_1 | 39.36% | 658 | 1e-90 | MIA_03381_1 |
| A0A170QY79_9ASCO | 33.75% | 566 | 6e-60 | Prp3p OS=Sugiyamaella lignohabitans GN=PRP3 PE=4 SV=1 |
| UniRef50_A0A170QY79 | 33.75% | 566 | 2e-56 | Prp3p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A170QY79_9ASCO |
| A0A0J9XJW5_GEOCN | 34.93% | 481 | 2e-55 | Similar to Saccharomyces cerevisiae YDR473C PRP3 Splicing factor, component of the U4/U6-U5 snRNP complex OS=Geotrichum candidum GN=BN980_GECA23s00538g PE=4 SV=1 |
| Q6CFM5_YARLI | 30.91% | 550 | 8e-49 | YALI0B05632p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B05632g PE=4 SV=1 |
| A0A060T410_BLAAD | 31.82% | 550 | 2e-48 | ARAD1C00748p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C00748g PE=4 SV=1 |
| A0A1E3PR32_9ASCO | 32.93% | 492 | 9e-47 | PRP3-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_20094 PE=4 SV=1 |
| Q5AH86_CANAL | 30.96% | 478 | 1e-39 | U4/U6-U5 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PRP3 PE=4 SV=1 |
| A0A1E4TEP4_9ASCO | 35.04% | 274 | 1e-27 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19525 PE=4 SV=1 |
| PRP3_YEAST | 29.41% | 187 | 2e-10 | U4/U6 small nuclear ribonucleoprotein PRP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP3 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0434
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
661
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_06053_1 MSSSRKRTGHNDEYPHKRSRISDSPPPNEDEIRSRAKLRQRQLDNSNNGRSSATPPPSEKRKLDMKAIRASIQARKAQKV AASSASPSASPTPPPPVLSNDTSLSSQRESALGLNTEIHPLLLETMTKSKQQSPDQRQDTPPKVTYNIPTYAKTSLTAQG TKNPYLAHLESSESAEQKKKPEDGYDPLLDSLMSQKTERQMRRKQAALSFVPQGKYLHQGERIRQEYEEKQAKLRAEEEA RRREEERKQRELAKYGEIGIAPTDGIINERSIRPSRPPIVEWWDEPLLSSVNISSYADFLANIDQDTTTQTVKYPQAITH YIQHPVLLSSPDVTDKQTPTLKLHLTKKETKRLRKNARAERLKEKQDRIRLGLDPAPPPKVKLSNLMSVLTNESISNPTL IEQRVRQEVAERQRIHEQTNQDRKLTKEQRQEKREAQTARSINLHGMYMSVFKLNCPLFDRRQRFKVGKNAQQLLLKGIA VSVGLPKKQEDKKEKGSSEDQQQKQQQLEQQSTTEQGKAFTLIIVQGSETKVRKYERLLMHRINWKEATPIEQDEEEGEE ENEQEKGKEDAKLPKKLQFPQIDLSQNECHQIWTGPVAKSETKAQTAEELLHHKGNNNNNKNHHLFTKWHGINDVASEID AKDLLSKFGYQNFWVLAHSLS
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.