MCA_06050_1

Protein

Length

90 amino acids

Browser: contigD:3119574-3120025-

RNA-seq: read pairs 1175, FPKM 159.5, percentile rank 85.5% (100% = highest expression)

Protein function

KEGG:	K10881	SHFM1	26 proteasome complex subunit DSS1
EGGNOG:	0Q0I7		DSS1/SEM1 family

Protein alignments

	%id	Aln length	E-value

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0529

Protein family membership

DSS1/SEM1 (IPR007834)

Domains and repeats

None predicted.

Detailed signature matches

IPR007834

DSS1/SEM1
1. PF05160 (DSS1_SEM1)
  
  29 - 87
  
  Pfam
  PF05160 (DSS1_SEM1)
2. SM01385 (DSS1_SEM1_2)
  
  27 - 87
  
  SMART
  SM01385 (DSS1_SEM1_2)

no IPR

Unintegrated signatures

cd13768 (DSS1_Sem1)

32 - 87

CDD
cd13768 (DSS1_Sem1)
mobidb-lite (disord...)

1 - 56

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

nuclear mRNA expor...

32L

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

33V

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

34S

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

35L

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

36E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

37D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

38D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

39D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

40E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

41F

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

42E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

43D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

44F

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

45P

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

46V

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

47E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

61E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

62H

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

63L

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

64W

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

65E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

66E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

68W

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

69D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

71D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

75D

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

77F

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

78S

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

80Q

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

81L

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

82K

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

84E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

85L

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

86E

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

87K

nuclear mRNA export protein (Thp1) interaction site
32L, 33V, 34S, 35L, 36E, 37D, 38D, 39D, 40E, 41F, 42E, 43D, 44F, 45P, 46V, 47E, 61E, 62H, 63L, 64W, 65E, 66E, 68W, 69D, 71D, 75D, 77F, 78S, 80Q, 81L, 82K, 84E, 85L, 86E, 87K
CDD
cd13768 (DSS1_Sem1)

Protein sequence

>MCA_06050_1
MSSTQDSTTTLSATSDASSATLGTNPNVEKALVSLEDDDEFEDFPVEDWNDRDLDPDLKEEHLWEEKWDDDDAEDDFSKQ
LKAELEKRSS

GO term prediction

Biological Process

GO:0006406 mRNA export from nucleus
GO:0043248 proteasome assembly

Molecular Function