MCA_05990_1
Gene name: ATM1
Description: mitochondrial inner membrane ATP-binding cassette (ABC) transporter; Iron-sulfur clusters transporter
Browser: contigD:2973727-2976058-
RNA-seq: read pairs 1006, FPKM 16.0, percentile rank 35.5% (100% = highest expression)
Protein function
| Annotation: | ATM1 | mitochondrial inner membrane ATP-binding cassette (ABC) transporter; Iron-sulfur clusters transporter | |
|---|---|---|---|
| KEGG: | K05663 | ABC.ATM | mitochondrial ABC transporter ATM |
| EGGNOG: | 0PFX8 | ATM1 | Performs an essential function in the generation of cytoplasmic iron-sulfur proteins by mediating export of Fe S cluster precursors from the mitochondrion |
| SGD closest match: | S000004916 | ATM1 | Iron-sulfur clusters transporter ATM1, mitochondrial |
| CGD closest match: | CAL0000178930 | ATM1 | Iron-sulfur clusters transporter ATM1, mitochondrial |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_01235_1 | 74.30% | 782 | 0.0 | MIA_01235_1 |
| A0A0J9XBJ2_GEOCN | 80.81% | 589 | 0.0 | Similar to Saccharomyces cerevisiae YMR301C ATM1 Mitochondrial inner membrane ATP-binding cassette (ABC) transporter OS=Geotrichum candidum GN=BN980_GECA09s00527g PE=4 SV=1 |
| A0A060TDD3_BLAAD | 77.63% | 590 | 0.0 | ARAD1D05544p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D05544g PE=4 SV=1 |
| A0A167CC69_9ASCO | 73.96% | 603 | 0.0 | ATP-binding cassette Fe/S cluster transporter ATM1 OS=Sugiyamaella lignohabitans GN=ATM1 PE=4 SV=1 |
| A0A1E3PK76_9ASCO | 74.02% | 589 | 0.0 | Mitochondrial ABC transporter OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_82717 PE=4 SV=1 |
| ATM1_YARLI | 67.22% | 601 | 0.0 | Iron-sulfur clusters transporter ATM1, mitochondrial OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATM1 PE=3 SV=1 |
| ATM1_CANAL | 68.27% | 602 | 0.0 | Iron-sulfur clusters transporter ATM1, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ATM1 PE=3 SV=2 |
| UniRef50_Q59R09 | 68.27% | 602 | 0.0 | Iron-sulfur clusters transporter ATM1, mitochondrial n=7 Tax=saccharomyceta TaxID=716545 RepID=ATM1_CANAL |
| A0A1E4TLB2_9ASCO | 67.86% | 588 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30683 PE=4 SV=1 |
| ATM1_YEAST | 63.78% | 613 | 0.0 | Iron-sulfur clusters transporter ATM1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ATM1 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9853
Predicted cleavage: 61
Protein family membership
None predicted.
Domains and repeats
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Domain
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Domain
Detailed signature matches
no IPR
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CYTOPLASMIC_D... (C...)
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-
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NON_CYTOPLASM... (N...)
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SIGNAL_PEPTIDE (Sig...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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TRANSMEMBRANE (Tran...)
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cd03253 (ABCC_ATM1_...)
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mobidb-lite (disord...)
Residue annotation
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Walker A/P-loop cd...
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ATP binding site c...
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Q-loop/lid cd03253
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ABC transporter si...
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Walker B cd03253
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D-loop cd03253
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H-loop/switch regi...
Protein sequence
>MCA_05990_1 MTIFSTGGLLAAAVRSGSSAATKTSSISFLANTCPRSLTNSIIKPATVLSRSFATTSSRDSNKSDSKPGVPLFSSNRSWL NSQKDINNTPAVNPILKKTSPAFSLSSFLTGKNNTIKQQIASFSTSTKNSFNSSSTSDKRQTLLLSESKTPTRQGDEIQK TILKNLAKYIWPKSSKSARFRVVIALSLLIAAKLLNVQVPFIFKGIVDDMNIDWVNQVGTVSTVVGAAVLSYGLARFGAV FFGELRNAIFATVAQSAIRQVALSTFRHLLRLDLGFHLSRQTGGVTRAIDRGTKGISYVLTSMVFHIIPISLEISLVCGI LSYNYGVNFALVTLLTVMTYSIFTIQTTTWRAKFRRRANAADNRAATVALDSLINFESVKYFNNEGYQAAKYDTALAQYE KASIQVQQSLAFLNSGQNFIFSSALTAMMYMACCGVADGSLTVGDLVLVNQLVFQLSVPLNFLGSVYRDLKQALLDMETL FKLQDVNVTIDDKPNAKPLDFKGGEIKFENVSFGYHPDRMILKNATFTIPAGHKVAIVGPSGSGKSTILRLLFRFYEVDE GRILIDGQDIRDITLESLRQAIGVVPQDSPLFNDTIRNNIRYGRLSATDEEVEMVTNRVHLGHLIDQLPEGFETKVGERG LMISGGEKQRLAISRVLLKDPPIVFFDEATSALDTETERLLLQNIHSIIKDRKLTSVFIAHRLRTVADTDKIIVLKGGSV LEEGNHHALLADENSFYHNLWQAQELHPEEAEAEEKAEVIDVDETKEGGDLAKKQL
GO term prediction
Biological Process
GO:0006810 transport
GO:0055085 transmembrane transport
Molecular Function
GO:0005524 ATP binding
GO:0016887 ATPase activity
GO:0042626 ATPase activity, coupled to transmembrane movement of substances
Cellular Component
GO:0016021 integral component of membrane