Protein

MCA_05950_1

Length
1,261 amino acids

Browser: contigD:2844231-2848017+

RNA-seq: read pairs 8048, FPKM 78.8, percentile rank 75.0% (100% = highest expression)

Protein function

EGGNOG:0PJVFFGSG_09491RNA binding effector protein Scp160
SGD closest match:S000003616SCP160Protein SCP160
CGD closest match:CAL0000181643orf19.5281Uncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_00689_162.00%11920.0MIA_00689_1
A0A0J9X310_GEOCN52.97%11970.0Similar to Saccharomyces cerevisiae YJL080C SCP160 Essential RNA-binding G protein effector of mating response pathway OS=Geotrichum candidum GN=BN980_GECA02s01132g PE=4 SV=1
UniRef50_A0A0J9X31052.97%11970.0Similar to Saccharomyces cerevisiae YJL080C SCP160 Essential RNA-binding G protein effector of mating response pathway n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X310_GEOCN
A0A161HGZ5_9ASCO42.86%13160.0Scp160p OS=Sugiyamaella lignohabitans GN=SCP160 PE=4 SV=1
A0A060T6Q6_BLAAD41.79%12970.0ARAD1B21010p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B21010g PE=4 SV=1
Q6CDS1_YARLI41.00%12220.0YALI0B21662p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B21662g PE=4 SV=1
A0A1E3PHS4_9ASCO41.11%12210.0Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83891 PE=4 SV=1
A0A1D8PF90_CANAL32.63%12322e-134Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.5281 PE=4 SV=1
A0A1E4TH53_9ASCO28.26%11115e-108Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_116405 PE=4 SV=1
SC160_YEAST30.26%11376e-105Protein SCP160 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCP160 PE=1 SV=3

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1948

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 200 400 600 800 1000 1261

Detailed signature matches

  1. Domain IPR004087
    K Homology domain
    1. SM00322 (kh_6)
  2. Domain IPR004088
    K Homology domain, type 1
    1. PF00013 (KH_1)
    2. G3DSA:3.30.13...
    3. SSF54791 (Eukaryoti...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. PS50084 (KH_TYPE_1)
  3. cd00105 (KH-I)
  4. cd02394 (vigilin_li...)
  5. mobidb-lite (disord...)

Residue annotation

  1. nucleic acid bindi...
  2. G-X-X-G motif cd00...
  3. nucleic acid bindi...
  4. G-X-X-G motif cd00...
  5. putative nucleic a...
  6. G-X-X-G motif cd02...
  7. nucleic acid bindi...
  8. G-X-X-G motif cd00...
  9. putative nucleic a...
  10. G-X-X-G motif cd02...
  11. putative nucleic a...
  12. G-X-X-G motif cd02...
  13. nucleic acid bindi...
  14. G-X-X-G motif cd00...

Protein sequence

>MCA_05950_1
MATIDETQSSLADNLMARHQALESSSTPAEETPYLNGDSPAPSEEAASPSEKTEATTAESSASYAKPAAPISKKIDINSF
DAFPELGPSKAVPLANGGAWGKQPVLKPIKVSGSNSAPSGAQIIRAPAKSQVTTDKFSLALEDRDPRYATIPSSILNSVR
TANNVTIDSSTTKQSKTSTFIIKGKPENVQKARRELLRALTVHVTETIRVPASSRASIIGPKGSNLKPITSKSGTQIQVA
KKEDTPTPADDDEDDEPLVDVVIEGDREGVEIAKNEIMAIVNSRVRHANMKISSVPTKVYPALGGPDNSLITSMEKEKNL
KITVPDHFQISKNGLQLPIVISGERSAVIEAKARLESIAQNILTTFGTKVIRVPKAVQLFISPADVFEKTGVVATTTIDP
ESWELFGPKNKLNEATDYLSTSGKGIKKVELTISKAHGNNVSHAKVLARYFKASGKFAELEKTHSVIISSPSEAELLNPS
LSNVTLEIVGSEDANISDCRKAIVSLVNATTVNKVLPINDIDPFFFKTLTPKSKHFTTIKSEYYVYLLAPEDEKLSSEID
LIYEGNPSDVEDDFGPSSDDISNALKSASKSLDDIRSHQKDLSCEILTIPVDDHKFILGPNGTTLNSILKGADASKETLV
TVHLGNEDVPQNLVKDSSELTPESVIVKGLSKQVHRVVKEIKEVIEEGHNYEVLSSYTTNFSFPAEHVNKLIGKGGANLT
KIREEFGVKIDVGEDGEGIIKGIKRNAEEAKQRIFNLGRRWADEVSLKLNIPNEYHATLIGTGGKFVKRLEEKYDVRIKF
PRGNSSDDDEPKDKPGQDEVLIRGPSRGAAKAKEEILELVQYEKDNSNTDTILVPAKTLSRIIGKNGEYINDIKDFTNTR
IDVGSHDDKDNGDSKVPITIVGTKTGIKQAAEKIMAIVKEIEDTVTEEIEVDPKYHRYIIGANGATMREIVQKAGEIFSS
RLIQIPQAGSNSSTIKVHGHKKAVSKIINSIKAIVEERENQVEILVPIPVERHGTIIGLGGQIKKEIESEFNVNILIPFQ
GSKDANGKLDENIKIIGSKENVEKAKAKVVALAADDFKVNVPLEYNNSVFDGGMMIKNLRNDYGVRVDLGKTVFDKDPFS
KIPAEAIGDESVDGKFKWTVVNEVTGDPPKINGATVKDEFITWKLKGSAEPCKKAKKVIEDTLERVKKYDSTGYLWLADP
SQYRLVIGPSGSNINNIREKSSCVIAIPKANAKKEANAIVIIGESSNVEKAKNLILSSINR

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0003723 RNA binding

Cellular Component

None predicted.