MCA_05938_1

Browser: contigD:2807506-2808064-

RNA-seq: read pairs 14, FPKM 0.9, percentile rank 8.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0511

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. Coil
   78 - 98

   COILS
   Coil (Coil)

   155 - 175

   COILS
   Coil (Coil)
2. NON_CYTOPLASM... (N...)
   21 - 185

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 20

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   16 - 20

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   4 - 15

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 3

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-noTM
   1 - 20

   SignalP euk
   SignalP-noTM (SignalP-noTM)
8. TMhelix
   4 - 26

   TMHMM
   TMhelix (TMhelix)
9. mobidb-lite (disord...)
   47 - 128

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   159 - 185

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_05938_1
MKFLVTLYITLFTFFALSTADFGMLGGKADLISKKFGKGGDNSKYVNEDKKEDLVELDDESDCEEEPVEYDIEEEDDCDF
EEEEEEEVEDVIEEEEEEEEPKKSGKLNKSAMMGKLGNKLGNMKSGKLNKLKSMKQMLGEKKSGMNMGNKMGGIKKKLAN
KKASKMQMLKGLKQKLNKKKMNKSN

GO term prediction