Protein
MCA_05925_1
Length
350 amino acids
Browser: contigD:2780880-2782051-
RNA-seq: read pairs 941, FPKM 33.1, percentile rank 55.4% (100% = highest expression)
Protein function
| KEGG: | K12179 | COPS6 | COP9 signalosome complex subunit 6 |
|---|---|---|---|
| EGGNOG: | 0PNSQ | Pfam:Mov34 | |
| CGD closest match: | CAL0000190180 | RPN8 | Proteasome regulatory particle lid subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00697_1 | 47.48% | 377 | 2e-110 | MIA_00697_1 |
| A0A0J9X8K7_GEOCN | 38.54% | 384 | 2e-76 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA04s04190g PE=4 SV=1 |
| UniRef50_A0A0J9X8K7 | 38.54% | 384 | 3e-73 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8K7_GEOCN |
| A0A060TDP7_BLAAD | 29.51% | 305 | 6e-39 | ARAD1D08998p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D08998g PE=4 SV=1 |
| Q6C7M5_YARLI | 25.50% | 302 | 2e-30 | YALI0D26884p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D26884g PE=4 SV=1 |
| A0A1E3PJS4_9ASCO | 31.25% | 304 | 8e-27 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_66207 PE=4 SV=1 |
| A0A1D8PNA8_CANAL | 28.69% | 122 | 3e-09 | Proteasome regulatory particle lid subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPN8 PE=4 SV=1 |
| A0A1E4TJT8_9ASCO | 24.37% | 238 | 4e-08 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_573 PE=4 SV=1 |
| A0A161HGS9_9ASCO | 27.48% | 131 | 9e-07 | Proteasome regulatory particle lid subunit RPN8 OS=Sugiyamaella lignohabitans GN=RPN8 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0994
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
350
Detailed signature matches
Protein sequence
>MCA_05925_1 MSENLYEPLDPEIHLKTFSQKSFILHPLPLLNISDYYTRSKSTDKPMVGGLMGTRNYKEVTAFIAFELLLKKDLPDENYL KSKLNLYSQTFPQYEFIGWFHILPNNPLIQPVKLSQKIHEQVAKVVDNPVLLIVYPNNEALPKGTRLRNNSNSPDIDMID GDEEENSKAEDVNTELPLNAYEPIYKDMKLEFIPMPPIQIETGEAERIAVDDIVKGSKEDEDYNLSESLTNQQGAIRMLH KRIKFLIEYLVHFQHIKKQQATDPSKQIDASEYAIIRKLNAFAYQLSSDRGRGFDSAIQKQEIDVLMATLLSTVMKGELS KLTANTVWASKRAFATNPVDIGDSSSNSSK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.