Protein
MCA_05916_1
Length
1,263 amino acids
Gene name: DSS1
Description: Exoribonuclease II, mitochondrial
Browser: contigD:2756841-2760633-
RNA-seq: read pairs 658, FPKM 6.4, percentile rank 19.7% (100% = highest expression)
Protein function
| Annotation: | DSS1 | Exoribonuclease II, mitochondrial | |
|---|---|---|---|
| EGGNOG: | 0PKE6 | PGUG_02338 | mitochondrial exoribonuclease Cyt-4 |
| SGD closest match: | S000004900 | DSS1 | Exoribonuclease II, mitochondrial |
| CGD closest match: | CAL0000186154 | MSU1 | Msu1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XDM4_GEOCN | 32.67% | 1154 | 2e-163 | Similar to Saccharomyces cerevisiae YMR287C DSS1 3'-5' exoribonuclease OS=Geotrichum candidum GN=BN980_GECA11s00076g PE=4 SV=1 |
| UniRef50_A0A0J9XDM4 | 32.67% | 1154 | 4e-160 | Similar to Saccharomyces cerevisiae YMR287C DSS1 3'-5' exoribonuclease n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XDM4_GEOCN |
| MIA_00705_1 | 33.79% | 879 | 1e-128 | MIA_00705_1 |
| A0A161HX18_9ASCO | 27.99% | 643 | 1e-50 | Dss1p OS=Sugiyamaella lignohabitans GN=DSS1 PE=4 SV=1 |
| DSS1_YEAST | 27.41% | 456 | 2e-32 | Exoribonuclease II, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DSS1 PE=1 SV=2 |
| A0A060T9P4_BLAAD | 27.27% | 462 | 1e-29 | ARAD1D20218p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D20218g PE=4 SV=1 |
| Q6CBW1_YARLI | 24.13% | 601 | 2e-29 | YALI0C15048p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C15048g PE=4 SV=1 |
| A0A1E3PE69_9ASCO | 24.94% | 401 | 2e-28 | Ribonuclease II and R (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7485 PE=4 SV=1 |
| A0A1D8PI61_CANAL | 23.68% | 494 | 2e-22 | Msu1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MSU1 PE=4 SV=1 |
| A0A1E4TEJ5_9ASCO | 27.21% | 419 | 2e-21 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_102843 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9945
Predicted cleavage: 43
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
200
400
600
800
1000
1263
Detailed signature matches
-
-
SSF50249 (Nucleic a...)
-
no IPR
Unintegrated signatures
-
-
PF00773 (RNB)
-
SM00955 (RNB_2)
-
mobidb-lite (disord...)
Protein sequence
>MCA_05916_1 MLISVHRKRVAKSFPRALTNLSHNSKFSTSIQRHFTKSAIIFNNVTPEDEVIDPFKSAPKKPYEVKEYKPLFPPRIELNN EEHVDTENPEGDAPPIPIKSTVEARSFSDIINDMRARQNRVLEIINTNDTSLDYIRTHWTSSANVFAAKQFKDQTSKNRK NIIPHDYTDQQMYMSHLSEGDLVETTSGDVGVILQVPDYKTQYQYAIMDHQGAVTYIPNQNSFVFRVPQFIQSSSPKTSD GKKDPRDVLASYIRVLDPDPRSPVVTVTHHLKEFLCPEIKKFIEQSLTWSSYQKSRHSSLNVITQLGNMFNELQETSDPI NISLFEVAYAVQQNIERALGQSNQSVNFALESFIEDDTLVEHDSDFLANMMNSRNSGKEKDTGEKEKTPAANDKYKPSQD KKSQFSILKAKFPPPKLQSIGSQKQRIVSKSLLYSIYTSIKTSFNTKVLFDSYNSYCPNFLTLLPFSLENGEKKALEAMR LMLSSSPHQEPRYSISKIPAATSDGGFNRLTQQLVRKEQVAMRANERARANERNVSQIPPFIKTLINAEKDPSLLEDYDL KQPSSSTQQKKRLSEQAKTEREILNLIQRYAVGDMESSETFSKSVVVLFLKRLFFYRNLLNKNSAKGKDDGDITPAKALK FLINIGIVSPNVSPVRYQSKLKTVEQGGSNLEKLIASNNHFLVESQNAEMTAGAASSPTGASSSSDYLLPDRVEELRREL DPDMSIYCIDDATAHEIDDGISISNTDQQIWNVFVHIADPSSALILDPKSVSSNTGSIPFEYLANLFKHAYQQTSTAYYP DTVIPMFPKWLTNHLGLVDDSALANLSNTDGIITQPKPPARRRCFTVEMKYDSLTKKIDLDSCEIYPSLLPKKSTINQIT YNKVDEIFTSKTTPSDVSPKTVSDLNKLLEVAVNLSKNRFKPTVDKESNIGGAISVSLPKPSITIDENLSLGGNDETQLD SITISQNTMSLARDLVAEFMVLCNSAVAEFMSSNKIPGIFRGQQLLINHQLPETNLPASLTTLPSLMPVKFSNPQPHLSK VQAKLFDSYQWDTESVKSSQDTSSGLGPRMSTTDSLLLLPVMKAATLGVTVERHMALGIPKYTHSTSPLRRFQDVITHWQ IHSHLLNQKSGSKSASSFDIFQLDTIAIKLMQTQRLLKQASFQSNNYWLLYKLYMLLHNPNLARGRSDVDENFALSDCIV TSPAFYGQQRVYLTKYGVSAYLDLNSSNNDSASPSKLANIGETLSCKIQDIDLSSLSVVVKAI
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.