Protein
MCA_05909_1
Length
914 amino acids
Browser: contigD:2742143-2744888+
RNA-seq: read pairs 1348, FPKM 18.2, percentile rank 38.9% (100% = highest expression)
Protein function
| KEGG: | K12878 | THOC1 | THO complex subunit 1 |
|---|---|---|---|
| EGGNOG: | 0PKZJ | FG05424.1 | nuclear matrix protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_04497_1 | 45.15% | 629 | 6e-165 | MIA_04497_1 |
| A0A0J9X9D6_GEOCN | 35.71% | 616 | 4e-98 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA05s07226g PE=4 SV=1 |
| UniRef50_A0A0J9X9D6 | 35.71% | 616 | 8e-95 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9D6_GEOCN |
| A0A060TC82_BLAAD | 38.77% | 276 | 2e-47 | ARAD1D34144p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D34144g PE=4 SV=1 |
| A0A167FKJ9_9ASCO | 28.51% | 484 | 1e-43 | Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_3043 PE=4 SV=1 |
| A0A1E3PDX3_9ASCO | 41.57% | 178 | 8e-34 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_80861 PE=4 SV=1 |
| Q6CB86_YARLI | 36.32% | 212 | 1e-29 | YALI0C21131p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C21131g PE=4 SV=1 |
| A0A1E4TC62_9ASCO | 45.83% | 120 | 4e-25 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_138709 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0191
Protein family membership
- THO complex, subunit THOC1 (IPR021861)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF11957 (efThoc1)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05909_1 MEAHILSTTESLSSLIDSFNDRQHLFDISPNTKSYTLDKSFSDDIITWYNSTIEPNASISDTNKSYLIELSIKNLLYKRI ASNTSSDKSHRLSTPACIMDLTFALRDAQKIDHTLPHIILEELLDIQPISWCEKFWPYLISRHSYIVPKNMSGSRAPGTT LIRLGNSLLRRLSKTQHARFSGEILMYLAAAFPLTEKSALNIRGAFNTDNVTYYQGDGRSNNDPIDSNNKNDNNNAVEPE TDETKKDATKDSADQDVEMEDVDKPTSKQDETGVEQNKPPAEDEKRNEMYRKFWSLQDVFRDPTVLFDESSQDEKQQSTN NNNNINNTSSNNKRMEEFKTTLTIVFNELKKWEAKYNTKRDRENEIRRQEMDLSDIDDEEEDLDNEEDENDDDDEDDDEE EANDGKKGSVDPSTKKHRSKKHHDIPFVPKWLTRRDLFDLQLKDVSFRRAVLTQMAILIEFLLSLTPKSKTSKYWQEGSN KSVLYSYTLSEEDTSFFKDLRRSLRKFNFTSLDFQPPYVRTIDAVLTRDRYWQYWKMMTCPPFLLNPVNSQSVIIDSKEL HSTNQMSEKDALTTDQIPIVKKAEEVLVRLQKPRPEFGLNMGTLQLSQVWEIPTGCDMLKKPQNYTIKHAEVYYQEIKEL EEEFKNNYELEVEVTDDEEEEEEKEKEKKKREEEQQPNPKKRKNPDDEEEEKETEKEKEKDNEKTENNDTKTEEKKEQEE EEEQKQEKPKKMKMVVKNLASSEERREYNEKIGSKNWRGLRAARAQGYWSRFGKITRGNGIGGLFEESEEEEDNNSSSRH DSSDNKLEQEGNATATTTTTNDDNEKGSEEGIKSQDSNDTLEKEISKYESVQEDNDDKDDAIIVDEGEGDTKEQQQQSND PITFSDEEMKNENENEKQEEEKSPSVISIDESPK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.