MCA_05908_1

Browser: contigD:2737212-2738619-

RNA-seq: read pairs 191, FPKM 5.0, percentile rank 17.4% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0243

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. NON_CYTOPLASM... (N...)
   24 - 468

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
2. SIGNAL_PEPTIDE (Sig...)
   1 - 23

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
3. SIGNAL_PEPTID... (S...)
   19 - 23

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
4. SIGNAL_PEPTID... (S...)
   7 - 18

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
5. SIGNAL_PEPTID... (S...)
   1 - 6

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
6. SignalP-TM
   1 - 23

   SignalP euk
   SignalP-TM (SignalP-TM)
7. mobidb-lite (disord...)
   421 - 449

   MobiDB Lite
   mobidb-lite (disorder_prediction)

   108 - 136

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_05908_1
MKFNLPLITSALGLVFSISPVNAGIIDFLQRRQQLSSVDQLPVSAFKNSTTYVDLTSTLTQTSTIVVTTVHPDATEQESR
VPSTTTVTSAKTVTSTIDVSSTIVIESTVTVPRESQPTESPKEEQEDNAADDETTSTIDITSTIDVTVTTVLTVTTLHPS
DVVSDAPVTTEEVTRAVIMKYPVASEFAVETSGSETLYSTVTLEQTQTMYLTKVVTRTLELEEQDQAEVATIAPYANNTL
SFYNSSSIADSAAAAPITTEAPLVSTQTLIDSTTVTSVIDVTLTSTVVQTLTLTQSDGAVQTTVVTNPYSYVSKKTTVVT
PTITLLQTVTLTRTSTVETLETTMKGTEAEVYTVVVTPTADPVAPVTVDGTVVTSAAPTYEPVTITTTITPDITSTIFHT
KFVTVALTVDPLSTVSTATPTAAVTESSEEVAESTATPLPSSSWGNWNNDTRPENKMFRRHVHHLHKL

GO term prediction