Protein
MCA_05869_1
Length
595 amino acids
Browser: contigD:2594187-2596205-
RNA-seq: read pairs 1443, FPKM 29.9, percentile rank 52.6% (100% = highest expression)
Protein function
| KEGG: | K14315 | NDC1 | nucleoporin NDC1 |
|---|---|---|---|
| EGGNOG: | 0PIF1 | FG10865.1 | Nuclear envelope protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03012_1 | 34.58% | 613 | 2e-97 | MIA_03012_1 |
| A0A0J9X8S1_GEOCN | 31.56% | 583 | 3e-84 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA06s00538g PE=4 SV=1 |
| UniRef50_A0A0J9X8S1 | 31.56% | 583 | 6e-81 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8S1_GEOCN |
| A0A1E3PRK2_9ASCO | 31.73% | 498 | 9e-66 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81016 PE=4 SV=1 |
| A0A060TDC6_BLAAD | 30.52% | 498 | 7e-64 | ARAD1B23628p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B23628g PE=4 SV=1 |
| Q6C358_YARLI | 30.28% | 535 | 2e-61 | YALI0F02409p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F02409g PE=4 SV=1 |
| A0A167EQS5_9ASCO | 29.10% | 512 | 8e-40 | Ndc1p OS=Sugiyamaella lignohabitans GN=NDC1 PE=4 SV=1 |
| A0A1E4TFP2_9ASCO | 27.23% | 437 | 1e-32 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_108156 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7468
Predicted cleavage: 11
Protein family membership
- Nucleoporin protein Ndc1-Nup (IPR019049)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF09531 (Ndc1_Nup)
-
no IPR
Unintegrated signatures
-
CYTOPLASMIC_D... (C...)
-
-
NON_CYTOPLASM... (N...)
-
-
TRANSMEMBRANE (Tran...)
Protein sequence
>MCA_05869_1 MAITRMAIRQSTIVASPPPYGTFAGEVNFTRVKLHYWVLGWFSLLLSSLLSIYFRHSFFTFFLSIIFQTPIIAFSVCCTS LFLRKKQIHVDYLTYPSLITEYCDRFFSKIFLRTFAAYTLSSFTFIATYGLQLDNLALTVPNQTYGSPFLNEKWVYFFIT LPFNLGLIGSVLHIGLDADRIILNLVKLDERAEKRIMEALPFVVKQSLFAAIIGAFAIPFIYIITRPFLWSFLVYFFSYF VRIHHSRSYSGLPISFDVLFKTFILTFILAFTWQFSYWVFMSYIARPPVSRGEYFTAKSPDRNGTLIEGLKNKNRNFNRT MAFLELELISLREKERRIEIFTDYDRKPVSAWESIRQECLKVLMAIDKNLKSKSDQKVSKKEDPKTITIHSPQTKIIPIK NQNIYADSAANNNSKLIQSIQDKDAVLSKTVTGALDKTTLKVRESISRYPKFLELITKSKYGTPLRFTLKRRVHQIIPNP TLTLSAVVSLTTLIACSRDEDKYGIVQRTFIETLDQMIQTLNKLIQFAEKPPIHWSDATGFNQNDLSDIYMIINALEEGL EEVIETFRKEIAKDLAPQLTARIHAYLEKLYSPYT
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.