MCA_05867_1

Browser: contigD:2588395-2589343-

RNA-seq: read pairs 3, FPKM 0.1, percentile rank 3.8% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0695

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   282 - 292

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. Coil
   108 - 131

   COILS
   Coil (Coil)
3. NON_CYTOPLASM... (N...)
   1 - 255

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)

   315 - 315

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
4. TMhelix
   292 - 314

   TMHMM
   TMhelix (TMhelix)

   255 - 277

   TMHMM
   TMhelix (TMhelix)
5. TRANSMEMBRANE (Tran...)
   256 - 281

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)

   293 - 314

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
6. mobidb-lite (disord...)
   176 - 198

   MobiDB Lite
   mobidb-lite (disorder_prediction)

Protein sequence

>MCA_05867_1
MIKYDIAVLSKLTVDMVALHVSHVLPKRPCELLDISREFMPLGNLPCKFYLLRNGRAEEIPEEDFAQSTETYTKKDSANS
NKNITYIIVFDRFGLTKCAMLHFNLLYLQVFKELKEQLEKAKARANGMLSSPPMIFKFVFLASFNGVSDLQRVQNALELK
AGVEWSVKEAVPIPSSQTVSSSHHNKSENQAQSPQNNLNDEPIDYFSSRIKSQTDPSSLTKKQYILSTTLKKKCGSSVTI
TRESTDASSNDNQYSLLGWILLFVIIFAAVPVFALSVLSTFDPELAWKVLDNYFLYIKKVYYLVISGVGIVTSVF

GO term prediction