Protein
MCA_05862_1
Length
240 amino acids
Gene name: LEA1
Description: U2 small nuclear ribonucleoprotein A'
Browser: contigD:2578085-2578871-
RNA-seq: read pairs 397, FPKM 20.4, percentile rank 41.9% (100% = highest expression)
Protein function
| Annotation: | LEA1 | U2 small nuclear ribonucleoprotein A' | |
|---|---|---|---|
| KEGG: | K11092 | SNRPA1 | U2 small nuclear ribonucleoprotein A' |
| EGGNOG: | 0PKII | LEA1 | U2 small nuclear ribonucleoprotein A |
| SGD closest match: | S000006134 | LEA1 | U2 small nuclear ribonucleoprotein A' |
| CGD closest match: | CAL0000184113 | LEA1 | U2 small nuclear ribonucleoprotein A' |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06390_1 | 68.91% | 238 | 7e-97 | MIA_06390_1 |
| A0A060T7G5_BLAAD | 54.58% | 240 | 2e-71 | ARAD1B18744p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B18744g PE=4 SV=1 |
| A0A161HKT8_9ASCO | 53.33% | 240 | 2e-69 | Lea1p OS=Sugiyamaella lignohabitans GN=LEA1 PE=4 SV=1 |
| UniRef50_A0A161HKT8 | 53.33% | 240 | 4e-66 | Lea1p n=16 Tax=Fungi TaxID=4751 RepID=A0A161HKT8_9ASCO |
| A0A0J9X5U2_GEOCN | 51.85% | 243 | 1e-64 | Similar to Saccharomyces cerevisiae YPL213W LEA1 Component of U2 snRNP OS=Geotrichum candidum GN=BN980_GECA03s04113g PE=4 SV=1 |
| A0A1E3PQX2_9ASCO | 52.30% | 239 | 4e-63 | L domain-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49674 PE=4 SV=1 |
| A0A1E4T9C1_9ASCO | 47.90% | 238 | 4e-55 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4485 PE=4 SV=1 |
| RU2A_CANAL | 33.61% | 241 | 2e-27 | U2 small nuclear ribonucleoprotein A' OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=LEA1 PE=3 SV=1 |
| RU2A_YARLI | 38.56% | 236 | 8e-24 | U2 small nuclear ribonucleoprotein A' OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=LEA1 PE=3 SV=1 |
| RU2A_YEAST | 34.23% | 111 | 2e-07 | U2 small nuclear ribonucleoprotein A' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LEA1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0725
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
240
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
PF14580 (LRR_9)
Protein sequence
>MCA_05862_1 MKLTTELIYAAPSYLNALSDRELLLRGKNIPLIENLGATRDLNDSIDLTDNMISVLGNFPKLLRLKTLLISHNRIQSVHP TTFAPQVPNLEMLVLSNNLLTNLSDLVFLSNLPNLLYLSLVDNPVTLKDYYRIWVIWQNPHIRVLDFQKVKDIERRKAKE LFGPSLSQPTELATKILGSTKAKTFSINTLNGSGDTKSASSSNSIKLTDEEKANLREQLKSATTLAEISRIEQALKSGTL
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.