Protein

MCA_05856_1

Length
397 amino acids

Browser: contigD:2563057-2564538-

RNA-seq: read pairs 2218, FPKM 68.9, percentile rank 72.3% (100% = highest expression)

Protein function

KEGG:K12175GPS1 COP9 signalosome complex subunit 1
EGGNOG:0PGADFG02532.1Cop9 signalosome complex subunit 1

Protein alignments

%idAln lengthE-value
MIA_03039_144.96%3879e-100MIA_03039_1
A0A0J9XHZ3_GEOCN32.15%3396e-36Similar to Saccharomyces cerevisiae YPR108W RPN7 Essential, non-ATPase regulatory subunit of the 26S proteasome OS=Geotrichum candidum GN=BN980_GECA18s00241g PE=4 SV=1
UniRef50_A0A0J9XHZ332.15%3391e-32Similar to Saccharomyces cerevisiae YPR108W RPN7 Essential, non-ATPase regulatory subunit of the 26S proteasome n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XHZ3_GEOCN
A0A060T709_BLAAD25.82%2132e-19ARAD1C17798p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C17798g PE=4 SV=1
A0A167FRI7_9ASCO29.71%1384e-15Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_3248 PE=4 SV=1
Q6C7V2_YARLI30.23%1723e-13YALI0D25102p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D25102g PE=4 SV=2
A0A1E3PK60_9ASCO27.27%1768e-06Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51822 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2724
Predicted cleavage: 15

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 350 397

Detailed signature matches

  1. Family IPR019585
    26S proteasome regulatory subunit Rpn7/COP9 signalosome complex subunit 1
    1. PF10602 (RPN7)
  2. Domain IPR011990
    Tetratricopeptide-like helical domain
    1. G3DSA:1.25.40.10
  3. Domain IPR000717
    Proteasome component (PCI) domain
    1. SM00088 (PINT_4)
    2. PF01399 (PCI)
  4. Domain IPR011991
    Winged helix-turn-helix DNA-binding domain
    1. G3DSA:1.10.10.10
    2. SSF46785 ("Winged h...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SM00753 (PINT)

Protein sequence

>MCA_05856_1
MLNVRKFTWKPPTVSHINASISKELYPEALKIAYEECKKSSKDIYLCKTLHKALLSQGLGEDSSTWITEREKEIAQEKAP
YTNTLETYMTKSNEDLTPLTTAHRKLGFLAFERDDLEEARNCISKYRDLTAGSQTENEDFNDIIALEVAVQFFTRYNSIP
ISYVAKASCFLMDSSTGSFKTPQSVVVGIICGLTLLQQQRYREAASVFLKVSPSAVSKASEFSSSQDLALYITLCALVTF
SRSELQYLNSADQVFISLSEDAPICKSLIEMLLSSRFKELVKLLNEYTPDFVADPFLAYHVVELVSAIKKRALLQYLSVY
RNVKLEYIAEEFILERDQLESLLKVYISEGILAALIDQKNGMLYYKRVDENYHKLIHSSKVADNYLNSCRVLLNTLV

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.