Protein
MCA_05830_1
Length
352 amino acids
Gene name: RPF2
Description: Ribosome biogenesis protein RPF2
Browser: contigD:2448697-2449816+
RNA-seq: read pairs 1416, FPKM 49.6, percentile rank 65.2% (100% = highest expression)
Protein function
| Annotation: | RPF2 | Ribosome biogenesis protein RPF2 | |
|---|---|---|---|
| KEGG: | K14847 | RPF2 | ribosome production factor 2 |
| EGGNOG: | 0PFUF | RPF2 | Ribosome biogenesis protein |
| SGD closest match: | S000001789 | RPF2 | Ribosome biogenesis protein RPF2 |
| CGD closest match: | CAL0000180822 | RPF2 | rRNA-binding ribosome biosynthesis protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05042_1 | 86.15% | 296 | 0.0 | MIA_05042_1 |
| A0A0J9X454_GEOCN | 74.15% | 294 | 2e-170 | Similar to Saccharomyces cerevisiae YKR081C RPF2 Essential protein involved in the processing of pre-rRNA and the assembly of the 60S ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA02s02760g PE=4 SV=1 |
| A0A060T1L9_BLAAD | 69.93% | 296 | 5e-154 | ARAD1C17622p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C17622g PE=4 SV=1 |
| RPF2_YEAST | 66.67% | 297 | 3e-143 | Ribosome biogenesis protein RPF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPF2 PE=1 SV=1 |
| UniRef50_P36160 | 66.67% | 297 | 8e-140 | Ribosome biogenesis protein RPF2 n=83 Tax=Fungi TaxID=4751 RepID=RPF2_YEAST |
| Q6CHX0_YARLI | 63.61% | 294 | 4e-137 | YALI0A03905p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A03905g PE=4 SV=1 |
| Q59ZG6_CANAL | 62.96% | 297 | 1e-136 | rRNA-binding ribosome biosynthesis protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPF2 PE=4 SV=1 |
| A0A1E3PPS4_9ASCO | 65.93% | 273 | 1e-135 | Brix-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45526 PE=4 SV=1 |
| A0A167DX00_9ASCO | 72.00% | 250 | 2e-135 | Rpf2p OS=Sugiyamaella lignohabitans GN=RPF2 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.8553
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
352
Detailed signature matches
-
-
SSF48371 (ARM repeat)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05830_1 MLRTVKPKNARSKRALEKRQPKLVENTKQALFVPGGNCNKILQDCMVDLNALKKPDTKKFQRRNEIRPFEDASSIEFFSE KNDCSLIVLATHNKKRPNNLTFIRTFNYKIYDMIELRLADNFKFLKDFRKATFQVGMKPLFTFNGPAFNTHPIYQHVKSL FLDFFRGQILDGLDVAGIQHVISLSVDEVDEERPLPKVHFRVYIIKTYRSDNPKLPRVELDEIGPRFDFIVGRRQAADPE METEAFKVPKQLEARTKKNIETDLLGDKLGRVHVDKQDLNQLQTRKMKGLKNKFSSKEGEEDDDEDEDDDEEMDDDSEDD SGDDDDGDDDDEDMLSEEDIIEEVPSKKVRTK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.