Protein
MCA_05828_1
Length
1,827 amino acids
Gene name: URB1
Description: Nucleolar pre-ribosomal-associated protein 1
Browser: contigD:2439181-2444734+
RNA-seq: read pairs 1230, FPKM 8.3, percentile rank 22.9% (100% = highest expression)
Protein function
| Annotation: | URB1 | Nucleolar pre-ribosomal-associated protein 1 | |
|---|---|---|---|
| KEGG: | K14861 | URB1 | nucleolar pre-ribosomal-associated protein 1 |
| EGGNOG: | 0QDCA | Ribosome biogenesis protein Urb1 | |
| SGD closest match: | S000001497 | URB1 | Nucleolar pre-ribosomal-associated protein 1 |
| CGD closest match: | CAL0000198519 | orf19.2778 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_05073_1 | 50.32% | 1884 | 0.0 | MIA_05073_1 |
| A0A0J9X4Y9_GEOCN | 34.81% | 1847 | 0.0 | Similar to Saccharomyces cerevisiae YKL014C URB1 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs OS=Geotrichum candidum GN=BN980_GECA03s02859g PE=4 SV=1 |
| UniRef50_A0A0J9X4Y9 | 34.81% | 1847 | 0.0 | Similar to Saccharomyces cerevisiae YKL014C URB1 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNAs n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X4Y9_GEOCN |
| A0A060SZ31_BLAAD | 31.75% | 718 | 2e-96 | ARAD1C05390p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C05390g PE=4 SV=1 |
| A0A167DSR4_9ASCO | 32.78% | 723 | 1e-93 | Urb1p OS=Sugiyamaella lignohabitans GN=URB1 PE=4 SV=1 |
| URB1_YEAST | 27.80% | 687 | 6e-52 | Nucleolar pre-ribosomal-associated protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=URB1 PE=1 SV=2 |
| Q6CFH7_YARLI | 24.85% | 849 | 4e-44 | YALI0B06875p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B06875g PE=4 SV=1 |
| A0A1D8PE47_CANAL | 26.30% | 749 | 5e-33 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2778 PE=4 SV=1 |
| A0A1E3PDW8_9ASCO | 25.86% | 263 | 5e-22 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53259 PE=4 SV=1 |
| A0A1E4TME5_9ASCO | 23.53% | 255 | 1e-10 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_95602 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0895
Predicted cleavage: 17
Protein family membership
None predicted.
Domains and repeats
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Domain
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Domain
1
200
400
600
800
1000
1200
1400
1600
1827
Detailed signature matches
no IPR
Unintegrated signatures
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CYTOPLASMIC_D... (C...)
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NON_CYTOPLASM... (N...)
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TRANSMEMBRANE (Tran...)
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mobidb-lite (disord...)
Protein sequence
>MCA_05828_1 MSRFKSRPLQLSDIDNEIINRLSNLVKDIPKSPSAYGLLHSFLTKRTDQILQIWGKVNESSEHILIARVTGDVASTITAC SEHPELTELGTYIITKILEDENRRSIIYRCLFIGKNLVALPVIALLESIATFRKGVMTNLLYSNFDLTAKAIPRILSLKG DLTAQIHQRRLLREKFIRFYLAFIANSSVVVRRDLVSQKNVITGWFRYINEDSPDLIYDSFNLLTKYVIRDSGFTKPMRM NLFNDWVLGHISILLNRTDSLTSNPDIKISKFVFDFMKFLVTDTTLGLKYNDKQWYLPDSEQGESGDRKVNNKLLGSFLK ILKPWDSSLKQDIALEVMSTSPELVAPYFSEDWPFPLDPMLTMFWISSMLFFSQAIQLPIPSSLYSSPYSEPPNVKIICE HILPQPLSKQMLSKSLLSDIPLIKYHAFQIMIFAFNKLESVIDLYKKKGWEDKYYTLLEEITMRLPEIPTIITSITTIAE NQIDSMELLKSVAIRAIASYSKLLPETFLKSKFVMPPKLMTALEADDFSNGLQLVNLQNVLEVQTRLGGVGKWWNKSGNL PYSLFTVLARVATLLQNDLFTNQIENLIKYLCHPYLIFQEVNSKMNPVNVFLNSLIVSTKEISEEERVKIWKLLDESVSR SIRSPYKYLDIISASTNNVQKEAIKISPFIAVLIEQWRFVDKTSDYSGVKNWLARFLRDSIITGCKSDILCKLLEKEKDP DLIKISNLLKVESNFSETQEKWKPVFDKKSTPDLILNTTKPENFGSLTLKTPFDLYTAKFRLKYEQKSSIKMALFAVLTK DLSSSLKNILATKDIFIDILADKSLWENFFLFITTNKFEHSAYLGIQSYLVNTLIPTLSISEQLSLFKYSIKIFDDLEYL KSKIDDLRSSKSKSNDLLELQEFLYIHLLKKSRENFIFSESDLLSCFEFAGTVKSNSLFISLKEYIGSLKTFSTAPEFLE LALKFSKLTEFSSSQLLSVLIRNVPHSDLSLLHKFTDGDSVDDLTFLSALTEILSPTVLEILDKGSDESLVKIYNHGIEI SISALDSKDTISEVLLETIINFLKKIMSHQFFISQDTEQKTLIKIIRFIAIYNGKKTVSPGMIYLVREIASRFTGRSKIS VNDETLMKPLRLWAQRTITWLAKRLAEDDQLGKLTKDALDAFYNAFTSPDFLYPLNPWLLVPTASLNTLLEIAATRYIES IEVVKFICAMIPTSRVLTSAYYSSPNSSNKHLPIEFTKLLQIVLNNERSIVAMEIGRTSKEAKGTGICLSYIISTLFHID VTRHSTKAIQEKVLTLCMGTYRAQDVLLIEILKKIESRISYSFCNAVVAWDITTSSSLSTKLPSLRNPEGSAPNFATGSK RKREEDKTAQLEDILIGGIADETEELDNVTPLFLLSQTSGSSSTGFEVSFDAALIENSIYNFDSSVPQFQLRPLHKNSRP VKETFQQFLQRYNQYSLELRSEMTYDTEFFLLLVTSSNILVQKESHLVVDNLRVFVESGILSLVIASLCHKDENISKIAL SLLVAARASVQHESYSNYPDKEIVEIITNKIFSYITSRQEQDPNEPILVPSFICLPIAVMIQSILSQPEHNLYEKVVFGY LLSGPSITTNSSKNEGNIPLFHAISRSTNTSESYGDSLLKDLIWLTEMLTASLVDSDALNAYSRRGVFEWALNLSNLLPL PPIDDGLSGWNKSTATESQRDAEASQALSSAKHYSRSYNILVHKKIVQLFKRAQEIVNKNEDGSLTSVGCGELATKNGFV SWIHNHLTIFGNEEESNSEAMDYQLALQKLGARTLIGMSKSQISNWTLLDAQSIKDYGSLALGIASK
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.