Protein

MCA_05777_1

Length
480 amino acids

Browser: contigD:2307998-2309441-

RNA-seq: read pairs 2047, FPKM 52.6, percentile rank 66.5% (100% = highest expression)

Protein function

KEGG:K10080LMAN1 lectin, mannose-binding 1
EGGNOG:0PIPQPGUG_00089Lectin family integral membrane protein
SGD closest match:S000001846EMP47Protein EMP47

Protein alignments

%idAln lengthE-value
A0A0J9X9W6_GEOCN36.95%4523e-88Similar to Saccharomyces cerevisiae YFL048C EMP47 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles OS=Geotrichum candidum GN=BN980_GECA06s03101g PE=4 SV=1
UniRef50_A0A0J9X9W636.95%4527e-85Similar to Saccharomyces cerevisiae YFL048C EMP47 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9W6_GEOCN
MIA_01875_160.09%2332e-86MIA_01875_1
A0A060SWC7_BLAAD33.41%4492e-65ARAD1A00792p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A00792g PE=4 SV=1
A0A1E3PH26_9ASCO32.43%4442e-53Concanavalin A-like lectin/glucanase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52348 PE=4 SV=1
Q6C6U0_YARLI28.43%4152e-22YALI0E06347p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E06347g PE=4 SV=1
EMP47_YEAST26.27%2362e-13Protein EMP47 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=EMP47 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1112

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 450 480

Detailed signature matches

  1. Domain IPR013320
    Concanavalin A-like lectin/glucanase domain
    1. SSF49899 (Concanava...)
  2. Domain IPR005052
    Legume-like lectin
    1. PS51328 (L_LECTIN_LIKE)
    2. PF03388 (Lectin_leg...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. Coil
  3. G3DSA:2.60.12...
  4. G3DSA:2.60.20...
  5. NON_CYTOPLASM... (N...)
  6. SIGNAL_PEPTIDE (Sig...)
  7. SIGNAL_PEPTID... (S...)
  8. SIGNAL_PEPTID... (S...)
  9. SIGNAL_PEPTID... (S...)
  10. SignalP-noTM
  11. TMhelix
  12. TRANSMEMBRANE (Tran...)
  13. cd07308 (lectin_leg...)

Residue annotation

  1. carbohydrate bindi...
  2. metal binding site...

Protein sequence

>MCA_05777_1
MISFTPKILAALSVVLSLSNSVVNADDNVVKIVSPLSIPRVIEPGKEIPNWSRMGDSKIETGRVVLTDIGKKDQHGLIWS
NVPNNMDAWTFDVDFTAGGPMTPGGGLGIWYLPKIGGIGPVNGASDKWDGLGILIDSTVKNDKKKDQNDDDYVGTIRGHL
NDGTISYAAETDPLKSAFSMCHVNYRNTGYLTQIKISYAPGLFRILVNNQLCLQTDKIALPRGGYFGISAGGTKDTDNFV
LYRVETIEGVHPSVEQVDAKIKGKASTTTQQTENTGAPKVVVASQETVVATANQQQQQQQQQQQQQQQQNFDKFSAEEFK
KIAEKLGELSKNLDVRHSELKTHFDPKKLMADLTKEIAAAISIQKVTQDKLEKRLETLEQTFREFVATQGRTIDGKSADT
KAHISEEFNKLRNRVEDINRSLKDHGQSLGSLPESLQEVVLNGGPSIWLAFGLFVIVQGVLIVGYMVYNSRRSSYHAKIL

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

GO:0016020 membrane