Protein

MCA_05770_1

Length
551 amino acids

Gene name: UTP6

Description: U3 small nucleolar RNA-associated protein 6

Browser: contigD:2289367-2291090-

RNA-seq: read pairs 651, FPKM 14.6, percentile rank 33.3% (100% = highest expression)

Protein function

Annotation:UTP6U3 small nucleolar RNA-associated protein 6
KEGG:K14557UTP6 U3 small nucleolar RNA-associated protein 6
EGGNOG:0PJM9UTP6rRNA processing protein Utp6
SGD closest match:S000002857UTP6U3 small nucleolar RNA-associated protein 6
CGD closest match:CAL0000174108orf19.2330SnoRNA-binding rRNA-processing protein

Protein alignments

%idAln lengthE-value
MIA_02152_149.46%5542e-161MIA_02152_1
A0A0J9YHQ4_GEOCN38.91%5503e-115Similar to Saccharomyces cerevisiae YDR449C UTP6 Nucleolar protein OS=Geotrichum candidum GN=BN980_GECA01s07908g PE=4 SV=1
UniRef50_A0A0J9YHQ438.91%5506e-112Similar to Saccharomyces cerevisiae YDR449C UTP6 Nucleolar protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9YHQ4_GEOCN
A0A1E3PS94_9ASCO39.96%4582e-95Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48769 PE=4 SV=1
A0A1D8PF14_CANAL45.36%3666e-93SnoRNA-binding rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2330 PE=4 SV=1
A0A167E8H7_9ASCO40.50%4424e-93Utp6p OS=Sugiyamaella lignohabitans GN=UTP6 PE=4 SV=1
A0A060TD92_BLAAD39.00%4592e-90ARAD1B22726p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B22726g PE=4 SV=1
Q6C1Q2_YARLI32.82%4544e-70YALI0F14377p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F14377g PE=4 SV=1
UTP6_YEAST39.31%3468e-69U3 small nucleolar RNA-associated protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP6 PE=1 SV=2
A0A1E4TES2_9ASCO33.03%3305e-55Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_104477 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1195

Protein family membership

Domains and repeats

  1. Domain
  2. Repeat
1 100 200 300 400 500 551

Detailed signature matches

  1. Family IPR013949
    U3 small nucleolar RNA-associated protein 6
    1. PF08640 (U3_assoc_6)
  2. Domain IPR011990
    Tetratricopeptide-like helical domain
    1. G3DSA:1.25.40.10
    2. SSF48452 (TPR-like)
  3. Repeat IPR003107
    HAT (Half-A-TPR) repeat
    1. SM00386 (hat_new_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Protein sequence

>MCA_05770_1
MAAQTARYYLEQSLVELEDLHEQGIFDKNELSIIMRRRTDFEHRIASRSTKPKDYALYAEYEKNVEKLRLKRVERLSREK
AESVSSDSESDSENNGKGAKKTKLGHGISSYAGPRRIYFIYDRGTKKFPNEIATLWLPYLNYANSQNATFVISKIYTRLL
QLHPTKAQVWIMAAKYELQTHNSIKAARLILQRAIRLNYGAGGFSGPNGSLQLWVEYFKLELIYVAQLLAKRKIMGIVTE
AQQLEMEREENEGLNFIVDGDNVEESKVRKSREDDVSEQKDVIELPSTQEIEQQAKEQLNSLPNVDVSMLGSVETNPALR
GDIALTVFDCAIPHLLKYTTHDIERQKIILKLLTQCFKVLDIFYSNSNKNSNKSEDDDSNLDLEYLGTHLIETALQQITS
LFDPAGIIKASPQIALLDTILPIRFVPASSPLFADATRQLLSNYTTKYIKDWFKYSMNPNSSSNSTISKNKKNKKSGSTI
NYQAPRIEYAQALAQYLKSRFQLLDEEQIQKEYGFESEKASTEQVHEHKEQLEPNLAMIIKGLVAKCETQQ

GO term prediction

Biological Process

GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0006396 RNA processing

Molecular Function

GO:0005515 protein binding
GO:0030515 snoRNA binding

Cellular Component

None predicted.