Protein
MCA_05731_1
Length
1,052 amino acids
Gene name: DIP2
Description: U3 small nucleolar RNA-associated protein 12
Browser: contigD:2191690-2194849-
RNA-seq: read pairs 1637, FPKM 19.2, percentile rank 40.4% (100% = highest expression)
Protein function
| Annotation: | DIP2 | U3 small nucleolar RNA-associated protein 12 | |
|---|---|---|---|
| KEGG: | K14556 | DIP2 | U3 small nucleolar RNA-associated protein 12 |
| EGGNOG: | 0PG22 | FG07055.1 | DOM34-interacting protein |
| SGD closest match: | S000004119 | DIP2 | U3 small nucleolar RNA-associated protein 12 |
| CGD closest match: | CAL0000188650 | DIP2 | SnoRNA-binding rRNA-processing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_06029_1 | 55.69% | 1063 | 0.0 | MIA_06029_1 |
| A0A0J9X889_GEOCN | 53.92% | 1059 | 0.0 | Similar to Saccharomyces cerevisiae YLR129W DIP2 Nucleolar protein, specifically associated with the U3 snoRNA, part of the large ribonucleoprotein complex known as the small subunit (SSU) processome OS=Geotrichum candidum GN=BN980_GECA04s02991g PE=4 SV=1 |
| A0A1E3PCQ7_9ASCO | 47.70% | 1063 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53470 PE=4 SV=1 |
| A0A167FG10_9ASCO | 46.88% | 1073 | 0.0 | Dip2p OS=Sugiyamaella lignohabitans GN=DIP2 PE=4 SV=1 |
| A0A060T3F4_BLAAD | 46.05% | 1062 | 0.0 | ARAD1C36960p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C36960g PE=4 SV=1 |
| UniRef50_A0A060T3F4 | 46.05% | 1062 | 0.0 | ARAD1C36960p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T3F4_BLAAD |
| Q6CDF6_YARLI | 43.19% | 1058 | 0.0 | YALI0C00913p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C00913g PE=4 SV=1 |
| Q5A756_CANAL | 40.82% | 1073 | 0.0 | SnoRNA-binding rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DIP2 PE=4 SV=1 |
| UTP12_YEAST | 41.09% | 1061 | 0.0 | U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DIP2 PE=1 SV=1 |
| A0A1E4TDW5_9ASCO | 38.64% | 1061 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31064 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0897
Protein family membership
None predicted.
Domains and repeats
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Domain
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Domain
-
Repeat
-
Repeat
1
100
200
300
400
500
600
700
800
900
1000
1052
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
SSF117289 (Nucleopo...)
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MCA_05731_1 MKKDYFRFEQDKAFGVIASASNILWLAPNSTSSNSGRGLVASLESASIWDLKTGQLLTQLNDEQTPSSAQASSSSTKYAE VTVVAEFQAQMIATGHSNGVIKIWDSISGSMIVAFNGHKKAVTTLKFDSTGTRLVSGSKDTNIIMWDLVNEVGLYRLRSH RDQIVGLELIKGKSKIITTNDEGEEQEEEIDSEEEIWLLSASKDGTVKLWDLETQHCIETHMAHKSNDCWSLAYSPSLGL AMTGSGNKEIGVWKVDLSAAIESAEVGKRLFKLGSINKQSSDRAHTIKFFTPEQEGEVKFVAVASSDRSIEFFKIKSLAE IKKSIARKLKRRREKGLDVDSVDSEYYLSETDPNEKFVSYTVIRTPAKIKSFDFAYQEYQTESGSPAILSSDKYKKPSFK DQIVLIASLANNSIDTYAVTAKGGKESHKAGPAEYARQYSIELPGHRTDIRALSLSSDDKMLASASNGLLKVWNVKTQNC IRTFECGYALCCSFLPGDGLIVVGTKTGQLELYDVASSTLLETVDAHSKSGNNGSVWSLHVGSDGKTFVTAGGSDRTVKF WEIKVVHEQILGTNRKVAKMKFKNTKTLELDDDVMAVRLSPDMKLVACSLFDSTVKVFFTESLKFFLNLYGHKLPVLSMD ISQDSKLLVTCSADKNIKIWGLDFGDCHRSIFAHQESIMGVAFDPIADPMAAFDGGFDDEEGAEVNSKIKAHNFFSVSKD HLVKYWDGDNFQQLQKLEGHHSEIWALTVAHSGDFIVTGSHDKSIRVWKRTDEQLFLNEEREKELESMYESTLTASFETD ENKKRELGPDEIEGVERDDDEDEENRERVGKQTIDTLKAGEKLIEALEIGLADLKLEREFEEKAQVAKSQDDIIALKNQW NSQRHIILVHKNISASEYVLNTALSIKPSELEDALLVLPFDKVIGFFEFISLWVSPPSKSAAAQVFNTDKYQNGAIKIAS KMTVISRLLFTLLRLYHRQLISNHALRETLENLRSGLKQKLAAQRDIMGYNQAGLKVLKNTWNAQHLKEFIDEEEQRKRD ERLAKKRIFTTI
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.