Protein

MCA_05695_1

Length
264 amino acids

Browser: contigD:2065543-2066399-

RNA-seq: read pairs 874, FPKM 40.8, percentile rank 60.7% (100% = highest expression)

Protein function

KEGG:K14397NUDT21 cleavage and polyadenylation specificity factor subunit 5
EGGNOG:0PKINFG06907.1Cleavage and polyadenylation

Protein alignments

%idAln lengthE-value
A0A167E8G4_9ASCO74.48%2392e-137Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_4716 PE=4 SV=1
MIA_00417_175.52%2419e-132MIA_00417_1
A0A1E3PDJ2_9ASCO72.57%2372e-131Cleavage and polyadenylation specific factor 5 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53154 PE=4 SV=1
A0A0J9X320_GEOCN69.49%2361e-120Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA01s07886g PE=4 SV=1
UniRef50_A0A0F0II4165.69%2391e-114Nucleotide hydrolase n=79 Tax=leotiomyceta TaxID=716546 RepID=A0A0F0II41_ASPPU
A0A060T7D0_BLAAD57.46%2283e-93ARAD1B22748p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B22748g PE=4 SV=1
Q6C1Q0_YARLI56.38%2437e-92YALI0F14421p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F14421g PE=4 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2785
Predicted cleavage: 11

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR016706
    Cleavage/polyadenylation specificity factor subunit 5
    1. PIRSF017888 (CPSF-25)
    2. PF13869 (NUDIX_2)

Protein sequence

>MCA_05695_1
MTTITKFARKTTILPPEQQPFSENQPKTIRLYPVSNYTFDVKDVLPEEDGSVVARLQRLQDQYAQFGMRRTCEGILLCHE
HGHPYILMLQIANTFFKLPGDYLQKEESEIEGFKRSLNERLAPPDYSKYAEDPINFEWSIGDCVAQWWRPNFETFMYPFI
PSHITRVKECKKTYLVTLPKKKVLTVPKNMKLLAVPLFELYDNTQRYGSQLSSIPLYLSKYNFEFVDSNDNVISSYPNSI
PKEISLLNPGQEQIKPEEEIKLEK

GO term prediction

Biological Process

GO:0006378 mRNA polyadenylation

Molecular Function

GO:0003729 mRNA binding

Cellular Component

GO:0005849 mRNA cleavage factor complex