Protein

MCA_05669_1

Length
1,291 amino acids

Gene name: PEX6

Description: Peroxisomal biogenesis factor 6

Browser: contigD:1978291-1982167+

RNA-seq: read pairs 1820, FPKM 17.4, percentile rank 37.6% (100% = highest expression)

Protein function

Annotation:PEX6Peroxisomal biogenesis factor 6
KEGG:K13339PEX6 peroxin-6
EGGNOG:0PFF8PEX6Peroxisomal biogenesis factor 6
SGD closest match:S000005273PEX6Peroxisomal ATPase PEX6
CGD closest match:CAL0000179650PEX6AAA family ATPase peroxin 6

Protein alignments

%idAln lengthE-value
MIA_00374_159.60%11930.0MIA_00374_1
A0A0J9XI44_GEOCN58.07%11210.0Similar to Saccharomyces cerevisiae YNL329C PEX6 AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p OS=Geotrichum candidum GN=BN980_GECA16s00428g PE=4 SV=1
UniRef50_A0A0J9XI4458.07%11210.0Similar to Saccharomyces cerevisiae YNL329C PEX6 AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p and participates in the recycling of peroxisomal signal receptor Pex5p n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XI44_GEOCN
A0A060T876_BLAAD53.53%10910.0ARAD1C27302p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C27302g PE=4 SV=1
A0A167DHA3_9ASCO61.48%8540.0AAA family ATPase peroxin 6 OS=Sugiyamaella lignohabitans GN=PEX6 PE=4 SV=1
PEX6_YARLI48.64%10630.0Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PEX6 PE=3 SV=2
A0A1E3PFC4_9ASCO52.43%9040.0AAA-domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_5313 PE=4 SV=1
Q59ZE6_CANAL45.14%10190.0AAA family ATPase peroxin 6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PEX6 PE=4 SV=1
A0A1E4TIH5_9ASCO51.04%7720.0Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_11627 PE=4 SV=1
PEX6_YEAST39.94%10190.0Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX6 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0277

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1291

Detailed signature matches

  1. Domain IPR029067
    CDC48 domain 2-like
    1. G3DSA:3.10.33...
  2. Domain IPR003959
    ATPase, AAA-type, core
    1. PF00004 (AAA)
  3. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  4. Domain IPR003593
    AAA+ ATPase domain
    1. SM00382 (AAA_5)
  5. SITE IPR003960
    ATPase, AAA-type, conserved site
    1. PS00674 (AAA)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.8.60
  2. G3DSA:3.40.50...
  3. cd00009 (AAA)
  4. mobidb-lite (disord...)

Residue annotation

  1. Walker A motif cd0...
  2. ATP binding site c...
  3. Walker B motif cd0...
  4. arginine finger cd...
  5. Walker A motif cd0...
  6. ATP binding site c...
  7. Walker B motif cd0...
  8. arginine finger cd...

Protein sequence

>MCA_05669_1
MPSLVLNQNESQVARPSIHHQFKSNLFFTESLPPDYALLSKDLESNIASNDSFVVISNISNIQTDSTASKWFLFKLASLN
DRLLTNSNTDISHLQTLLPPHSCLVSSLSTHTIASLSNNVFIRPINPVVLENVIVLCPHHQYNPQNDNFSLFYSTQSSSI
LRQGEFCQSLGGIIKLCDPVDQGIVSPTKTKITIVKDTTIPPSNQGLLNNTTDKQQSVENNDDDEIAKYLDFVNDSTSLS
KSLELNDSQFSKPIKVIPLKHQIPNTSIVPFPHFKDDPESRAFAKVDLLAELGCFSGDAMILKSKNGDTTRHVTLYSYPE
PNTVPSKVIYISPVLLHNLGSPTEVLISKSHPIIKTESKSESSSTADECSYAKHIKTAKEVTISRLASPVTTDRTLQQAF
LSGLRVYFESCHRIVRNGDVITIPIDTILAKTLFSTNSSNSNNPNSNGQDDADEGPIPQGKPNAVAWFKITNVDYDSENS
NGDDVIINPSQTRMIQSGIVTGNTISTKLPWKQYLSLPLYPDFDGFLQTNNKLFTYASKFQQYLAASISPLGASLQTTIL
LSSTKRGAGKTSLVHGIAESMGIHVFEIDGYNSTSDNDAKTFGILKARIERAFQDINPCIVLIKHLDAIAKKSEQDGKDG
AGISSNIIQLIDSLFGDNNDENSQNKKNFILVATVADADKLSESVRSKFKFELELGVPSEPERLQIFNFISSKILPTEVT
FLNFGNTKLPITYSLRNDVSLSTLALQSAGLTPPDLKSIIQTSKQKALKRLTKIVISNKRIYNDNSETTLEGKPPTLYDL
ILSSGGVIKITPDDMEQAISEARQKYSDSIGAPRIPNVSWDDVGGLENVKKEILDTIEMPLKYPELFSGGMKKRSGILFY
GPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELDSVAPKRGNQGDSGGVMD
RIVSQLLAELDGMSGGGGEGVFVVGATNRPDLLDEALLRPGRFDKMVYLGVSDTHEKQQTILEALTRKFKLSSDISLQQI
AQKCPFTYTGADFYAMCSDAMLNAMTRTANEVDEKFKKFNETERIPHNLKPVSIRWWFENVAKEEDIDVVVTEKDFDKSL
RELIPSVSAEELRHYLRVRENFQSGKKKAQSSSGNNNEDGSNNNQLGVQLDSNNNSARIEDLIQSAIKASLEENNNTVNN
VDSPNDPSSRSSESTLLNSSSSENQPTTNGNAAVTSNGSKDNNNNNNNNNNNNNNNNNNNTSSFAHTNGNGSSRNGNRDK
GKGKGKQKRHH

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005524 ATP binding

Cellular Component

None predicted.