Protein

MCA_05659_1

Length
254 amino acids

Gene name: MRT4

Description: Ribosome assembly factor MRT4

Browser: contigD:1949415-1950307+

RNA-seq: read pairs 1134, FPKM 54.9, percentile rank 67.4% (100% = highest expression)

Protein function

Annotation:MRT4Ribosome assembly factor MRT4
KEGG:K14815MRT4 mRNA turnover protein 4
EGGNOG:0PFZ8MRT4mRNA turnover protein
SGD closest match:S000001492MRT4Ribosome assembly factor MRT4
CGD closest match:CAL0000181896MRT4Ribosome assembly factor mrt4

Protein alignments

%idAln lengthE-value
MIA_04360_161.35%2512e-104MIA_04360_1
A0A060T390_BLAAD61.89%2441e-102Ribosome assembly factor mrt4 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C35420g PE=3 SV=1
A0A1E3PT08_9ASCO58.87%2484e-95Ribosome assembly factor mrt4 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_31013 PE=3 SV=1
A0A0J9XD05_GEOCN55.78%2514e-95Ribosome assembly factor mrt4 OS=Geotrichum candidum GN=BN980_GECA11s00384g PE=3 SV=1
A0A1E4TIY4_9ASCO55.37%2426e-91Ribosome assembly factor mrt4 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30070 PE=3 SV=1
Q6BZS2_YARLI55.33%2444e-86Ribosome assembly factor mrt4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F31317g PE=3 SV=1
UniRef50_Q6BZS255.33%2449e-83Ribosome assembly factor mrt4 n=3 Tax=saccharomyceta TaxID=716545 RepID=Q6BZS2_YARLI
A0A167CYL2_9ASCO55.50%2001e-79Ribosome assembly factor mrt4 OS=Sugiyamaella lignohabitans GN=MRT4 PE=3 SV=1
Q5AC00_CANAL45.27%2435e-70Ribosome assembly factor mrt4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=MRT4 PE=3 SV=1
MRT4_YEAST45.71%2453e-69Ribosome assembly factor MRT4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MRT4 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1142

Protein family membership

Domains and repeats

None predicted.

Detailed signature matches

  1. Family IPR001790
    Ribosomal protein L10P
    1. PF00466 (Ribosomal_L10)
  2. Family IPR033867
    Ribosome assembly factor Mrt4
    1. cd05796 (Ribosomal_...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF160369 (Ribosoma...)

Residue annotation

  1. 23S rRNA interface...
  2. putative Interface...

Protein sequence

>MCA_05659_1
MPKSKRAKLVTLSKTEKKTREDKEKIFQDIQQEVDKYRYVWVFSVSNMRNTFLKDVRQDWTGSRILFGRTKVMAKALGTS
PEEAYLPNLDKLAGPQYNYMKGGRPEAPLKSTENVEVGLLLTNETPETVREYFDSFVKKDFARAGIISPVSFVVPEGIVY
STGGQLPAEDDVPLPHSMEATLRQLGMPTRLKAGKIIIDQPYEVCSEGKPLNSNQTRLLKTFGLAVADFRMNLLAYYDKE
VENVFDEAEEKAKK

GO term prediction

Biological Process

GO:0000027 ribosomal large subunit assembly
GO:0042254 ribosome biogenesis

Molecular Function

None predicted.

Cellular Component

GO:0005622 intracellular