MCA_05656_1

Browser: contigD:1941098-1941293+

RNA-seq: read pairs 38228, FPKM 7266.9, percentile rank 99.9% (100% = highest expression)

Protein alignments

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0224

Protein family membership

None predicted.

Domains and repeats

Detailed signature matches

no IPR

Unintegrated signatures

1. CYTOPLASMIC_D... (C...)
   64 - 64

   PHOBIUS
   CYTOPLASMIC_DOMAIN (Cytoplasmic domain)
2. NON_CYTOPLASM... (N...)
   17 - 39

   PHOBIUS
   NON_CYTOPLASMIC_DOMAIN (Non cytoplasmic domain)
3. SIGNAL_PEPTIDE (Sig...)
   1 - 16

   PHOBIUS
   SIGNAL_PEPTIDE (Signal Peptide)
4. SIGNAL_PEPTID... (S...)
   12 - 16

   PHOBIUS
   SIGNAL_PEPTIDE_C_REGION (Signal peptide C-region)
5. SIGNAL_PEPTID... (S...)
   3 - 11

   PHOBIUS
   SIGNAL_PEPTIDE_H_REGION (Signal peptide H-region)
6. SIGNAL_PEPTID... (S...)
   1 - 2

   PHOBIUS
   SIGNAL_PEPTIDE_N_REGION (Signal peptide N-region)
7. SignalP-TM
   1 - 16

   SignalP euk
   SignalP-TM (SignalP-TM)
8. TMhelix
   41 - 63

   TMHMM
   TMhelix (TMhelix)
9. TRANSMEMBRANE (Tran...)
   40 - 63

   PHOBIUS
   TRANSMEMBRANE (Transmembrane region)
10. mobidb-lite (disord...)
    18 - 37

    MobiDB Lite
    mobidb-lite (disorder_prediction)

Protein sequence

>MCA_05656_1
MQFQLIIATLVASVAAAGNGTHPNGTSPNSTHTAAPIPDSGASGLFASAGLVGAVVAGGVALML

GO term prediction