Protein

MCA_05625_1

Length
823 amino acids

Gene name: SUV3

Description: ATP-dependent RNA helicase SUV3, mitochondrial

Browser: contigD:1826440-1828912+

RNA-seq: read pairs 670, FPKM 10.0, percentile rank 26.0% (100% = highest expression)

Protein function

Annotation:SUV3ATP-dependent RNA helicase SUV3, mitochondrial
KEGG:K17675SUPV3L1 ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:3.6.4.13]
EGGNOG:0PIPBSUV3ATP-dependent RNA helicase SUV3
SGD closest match:S000005950SUV3ATP-dependent RNA helicase SUV3, mitochondrial
CGD closest match:CAL0000176369SUV3ATP-dependent RNA helicase SUV3, mitochondrial

Protein alignments

%idAln lengthE-value
MIA_04901_153.61%7350.0MIA_04901_1
A0A0J9X6H9_GEOCN49.45%7300.0Similar to Saccharomyces cerevisiae YPL029W SUV3 ATP-dependent RNA helicase, component of the mitochondrial degradosome along with the RNase Dss1p OS=Geotrichum candidum GN=BN980_GECA03s01176g PE=4 SV=1
UniRef50_A0A0J9X6H949.45%7300.0Similar to Saccharomyces cerevisiae YPL029W SUV3 ATP-dependent RNA helicase, component of the mitochondrial degradosome along with the RNase Dss1p n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6H9_GEOCN
A0A1E3PL02_9ASCO45.85%5303e-159p-loop containing nucleoside triphosphate hydrolase protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_9234 PE=4 SV=1
A0A060TD10_BLAAD43.81%5252e-145ARAD1D47212p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D47212g PE=4 SV=1
A0A167EDS7_9ASCO44.92%4725e-139Suv3p OS=Sugiyamaella lignohabitans GN=SUV3 PE=4 SV=1
A0A1E4TCG1_9ASCO40.39%5152e-125Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32624 PE=4 SV=1
SUV3_CANAL38.35%5714e-122ATP-dependent RNA helicase SUV3, mitochondrial OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SUV3 PE=3 SV=2
SUV3_YEAST39.51%5673e-119ATP-dependent RNA helicase SUV3, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SUV3 PE=1 SV=2
Q6C1L7_YARLI40.26%5446e-118YALI0F15147p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F15147g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.9942
Predicted cleavage: 40

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 100 200 300 400 500 600 700 823

Detailed signature matches

  1. Domain IPR014001
    Helicase superfamily 1/2, ATP-binding domain
    1. PS51192 (HELICASE_A...)
    2. SM00487 (ultradead3)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR001650
    Helicase, C-terminal
    1. PS51194 (HELICASE_CTER)
    2. SM00490 (helicmild6)
    3. PF00271 (Helicase_C)
  4. Domain IPR022192
    Mitochondrial degradasome RNA helicase subunit, C-terminal domain
    1. PF12513 (SUV3_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...
  3. cd00046 (DEXDc)
  4. cd00079 (HELICc)
  5. mobidb-lite (disord...)

Residue annotation

  1. ATP binding site c...
  2. putative Mg++ bind...
  3. nucleotide binding...
  4. ATP-binding site c...

Protein sequence

>MCA_05625_1
MLGRNIKSGTLFRNICRRNQSLASFSTTSLLLRHPSKRNESLLPETGSKKKYTSERRQKQVSHYKPVDLQSDVTVRRFYR
MTIDFFAKFQKNKPVLKEISQTKPCTPERKEKFDEVLKIYLSILSNFCKVNETKVWSMVRMARVDDPLPIDKVLEEFKRD
FWQSERTYLDYENDQLAFTNYVDNPPLLPTYGRIWAIFENYKFVQDSKESKAIIDQTLQLFLASFLRYYRTKTLFAASGS
RNNVSNMDLKNPEEWFSQARQLKRKVVLHIGPTNSGKTYSALKALEKSNSGYYAGPLRLLAREVYNRFKAAGKKCNLVTG
EEVIEDYDAFGLPVKVSSGTIEMVDTTRPMDVAVIDEIQMIEDTSRGWAWTQAFLGVQAREVHLCGDPSSEEIIRYMCSK
TGDELEIKKYFRLSPLKVDNKPIDSKLKSLRPGDCIVAFSKNDLLDWKSEIERLKKSNCSIIYGALPPESRTKQADLFND
SQNNGYEYLVASDAVGMGLNLSIKRIIFLTTKKFNGKHKAAITISQIKQIAGRAGRYKSAPSSSSTGAQIEEQQQLRNSD
PASPNGRVSALSTKDLQYIRKCLSADTPKIKQFGLFPSHEMFRAFSLPLISHQPFVNILNQIQVTTEMDKNSFLCGMDNM
IDNSKLMETIRGLTLNEQMVLSKAPVKTRIDKNIYAFQSLCQVVAASKTVTPLDIPQLGIAALQRQGPFRIEDINEFEVI
HSNLILYLWLSYRFPMNFRDRMGAFELKALCEKKIDQALIDTRNKRLAKWEKTINRRKSLEEKEEEEEEIEEIEEIEVDT
NKVDPIQDSNNSSSTISTSSSPA

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0016817 hydrolase activity, acting on acid anhydrides

Cellular Component

None predicted.