Protein
MCA_05610_1
Length
674 amino acids
Gene name: NOT5
Description: CCR4-NOT core subunit
Browser: contigD:1793825-1796067-
RNA-seq: read pairs 2545, FPKM 46.6, percentile rank 63.7% (100% = highest expression)
Protein function
| Annotation: | NOT5 | CCR4-NOT core subunit | |
|---|---|---|---|
| KEGG: | K12580 | CNOT3 | CCR4-NOT transcription complex subunit 3 |
| EGGNOG: | 0PIR5 | NOT5 | ccr4-Not transcription complex |
| SGD closest match: | S000001300 | NOT3 | General negative regulator of transcription subunit 3 |
| CGD closest match: | CAL0000183176 | NOT5 | CCR4-NOT core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03239_1 | 78.97% | 252 | 2e-119 | MIA_03239_1 |
| A0A0J9X7A6_GEOCN | 72.63% | 274 | 6e-118 | Similar to Saccharomyces cerevisiae YPR072W NOT5 Subunit of the CCR4-NOT complex OS=Geotrichum candidum GN=BN980_GECA03s05367g PE=4 SV=1 |
| UniRef50_A0A0J9X7A6 | 72.63% | 274 | 1e-114 | Similar to Saccharomyces cerevisiae YPR072W NOT5 Subunit of the CCR4-NOT complex n=2 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X7A6_GEOCN |
| A0A060TAC6_BLAAD | 80.37% | 219 | 3e-115 | ARAD1D22792p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D22792g PE=4 SV=1 |
| A0A1E3PQM6_9ASCO | 72.60% | 219 | 3e-104 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_80906 PE=4 SV=1 |
| A0A167FJU6_9ASCO | 69.05% | 210 | 6e-98 | CCR4-NOT core subunit NOT3 OS=Sugiyamaella lignohabitans GN=NOT3 PE=4 SV=1 |
| Q6C6T6_YARLI | 67.12% | 222 | 2e-95 | YALI0E06435p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E06435g PE=4 SV=1 |
| A0A1E4TER9_9ASCO | 64.84% | 219 | 5e-93 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1991 PE=4 SV=1 |
| NOT3_YEAST | 49.32% | 221 | 6e-57 | General negative regulator of transcription subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NOT3 PE=1 SV=2 |
| A0A1D8PE87_CANAL | 41.78% | 225 | 8e-44 | CCR4-NOT core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=NOT5 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.5204
Protein family membership
- CCR4-NOT complex, subunit 3/ 5 (IPR012270)
Domains and repeats
-
Domain
1
100
200
300
400
500
600
674
Detailed signature matches
-
-
PIRSF005290 (NOT_su...)
-
-
-
PF04065 (Not3)
-
-
-
PF04153 (NOT2_3_5)
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05610_1 MAQRKLQQEMDRVFKRVTEGVALFDSIYDKVQTTTNQSQKEKLEQDLKREIKKLQRLRDQIKTWMGSNDIKDKKMLTEQR KLIESEMERFKACEKEMKTKAYSKEGLTNSAKLDPKEKEREATKNFISSMIEELDRQVENVEAEQETTQNSMKRGKKDTQ KMERINELEEILDRHRWHLSKLELILRMLENGNLSPDIVNNIQDDIRYYVESNADPDFAEDEEIYDELNLDDDEDNFDLD QKQEEVPGHSLEDLAVDHEKEKDTPLELAIDATPGSALSALLKSASSSSHASHSTSSAGSASGKSAITNVAASAAPSSSG NPSSSHKPEPLSRKSTLTSSTPTASTSSSVSPISQNASAAIPSATTGGSLKPAPQPVRSTNELKYASAAAAANAQSSNPN IPQGLSPLPPPSAQMLQQTAELSSASGATPPGLTSSPATMHVLPAAVKAPWAEKASSADKQDSSNDSAHTQAFVNKASKK DEHAKDVKTPSAKVKEASVTSTPKVTLPPGLQDLIHSFDAAKERIGTPPPITSISKLVESSFLNAPDSISEMTLPRHYYP QNPYPTQPFYPQEPLQSFASPVTFSKMELETLFFIFYYKQGTYHQYLAAKELKNRSWRYHKQLMTWFQRYEEPKTINNEF EQGTYRFFDFEGAWGQRRRPNFTFEYQFLEDETV
GO term prediction
Biological Process
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
None predicted.
Cellular Component
GO:0005634 nucleus
GO:0030015 CCR4-NOT core complex