Protein

MCA_05588_1

Length
1,694 amino acids

Gene name: GRR1B

Description: SCF E3 ubiquitin ligase complex F-box protein GRR1

Browser: contigD:1734155-1739240+

RNA-seq: read pairs 823, FPKM 6.0, percentile rank 19.1% (100% = highest expression)

Protein function

Annotation:GRR1BSCF E3 ubiquitin ligase complex F-box protein GRR1
KEGG:K10273FBXL7 F-box and leucine-rich repeat protein 7
EGGNOG:0QE71FG00816.1cyclic nucleotide-binding
SGD closest match:S000003850GRR1SCF E3 ubiquitin ligase complex F-box protein GRR1
CGD closest match:CAL0000188094CAALFM_CR02460WAUncharacterized protein

Protein alignments

%idAln lengthE-value
MIA_05220_173.39%4510.0MIA_05220_1
A0A0J9X9P5_GEOCN68.16%3806e-175Similar to Saccharomyces cerevisiae YJR090C GRR1 F-box protein component of the SCF ubiquitin-ligase complex OS=Geotrichum candidum GN=BN980_GECA06s03002g PE=4 SV=1
UniRef50_A0A0J9X9P568.16%3801e-171Similar to Saccharomyces cerevisiae YJR090C GRR1 F-box protein component of the SCF ubiquitin-ligase complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9P5_GEOCN
Q6C384_YARLI66.04%3748e-166YALI0F01837p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F01837g PE=4 SV=1
A0A1E3PKV1_9ASCO61.89%4122e-157RNI-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13183 PE=4 SV=1
A0A1E4TJ14_9ASCO50.85%3526e-110Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30072 PE=4 SV=1
Q59V20_CANAL44.05%3701e-83Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR02460WA PE=4 SV=1
A0A167FYJ8_9ASCO24.68%3162e-13SCF ubiquitin ligase complex subunit GRR1 OS=Sugiyamaella lignohabitans GN=GRR1 PE=4 SV=1
A0A060TC04_BLAAD28.18%1814e-13ARAD1B18898p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B18898g PE=4 SV=1
GRR1_YEAST22.39%4026e-11SCF E3 ubiquitin ligase complex F-box protein GRR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GRR1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0057

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
  4. Repeat
1 200 400 600 800 1000 1200 1400 1694

Detailed signature matches

  1. Domain IPR014710
    RmlC-like jelly roll fold
    1. G3DSA:2.60.12...
  2. Domain IPR018490
    Cyclic nucleotide-binding-like
    1. SSF51206 (cAMP-bind...)
  3. Domain IPR000595
    Cyclic nucleotide-binding domain
    1. PF00027 (cNMP_binding)
    2. PS50042 (CNMP_BINDI...)
    3. SM00100 (cnmp_10)
  4. Domain IPR001810
    F-box domain
    1. SSF81383 (F-box domain)
    2. PS50181 (FBOX)
    3. SM00256 (fbox_2)
    4. PF12937 (F-box-like)
  5. Domain IPR032675
    Leucine-rich repeat domain, L domain-like
    1. G3DSA:3.80.10.10
  6. Repeat IPR006553
    Leucine-rich repeat, cysteine-containing subtype
    1. SM00367 (LRR_CC_2)
  7. Repeat IPR001611
    Leucine-rich repeat
    1. PF13516 (LRR_6)
  8. SITE IPR018488
    Cyclic nucleotide-binding, conserved site
    1. PS00889 (CNMP_BINDI...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.20.12...
  3. SSF52047 (RNI-like)
  4. cd00038 (CAP_ED)
  5. mobidb-lite (disord...)

Residue annotation

  1. ligand binding sit...
  2. flexible hinge reg...
  3. ligand binding sit...
  4. flexible hinge reg...

Protein sequence

>MCA_05588_1
MPLSSPERGKSSNTSTDNTGSQNQSQQHDSSTTSTPLTLSGEAATQPHVSSQSSSSSSSQDNVSQNFKPALELDTRFSTS
FNTNSPLPSTQDLQSQIQEQKTQSLPQKLSINTSRPSQEPVKISSLIDAPRPPESFDPSIPETSYTTTTKTNFKEDTTPT
IPVSGILDQNPQSPSKQSSSSNVLVPSSQTGVGQSDFSTETRQNALPYSSIDTPVRTTPSPRGSSSASNSPNFNNNMFNR
RKSMPSILHSPQSTHQSGYNQHAPPRHLIEKLRQFSLFNSAPESFLNAIASKLRPLHVSAQEFIITEGEEARAMYWILRG
SVGIVSLDGESVHAELGPGAFFGEIGILFDRPRTASVQTRTKCLLVVLTAEALNEVLPSYPDIERLIRDEAQERLSVLEK
NRKAKAETTVNKPPQQNSHSQQSLESSTFTRSYQTKFEQTNNNNTENNNNDDNNINSSAASSGNTLGMSNVLPSPSNVDS
FNLSAKSRKQSVVPPPLSPATTPVTENAPTSRLCPRQTFPKLESSNAASSLVQPSPATTTPTTNYVSRRSSIGDHIYLEN
TRVRQLLEEVSPFADLPNHILHKLALTLEPQSYPPFQNIITQGKPGKDIYFILDGKVEVIDEAAGNTTLARLSRGAYFGE
MSFLSLAPLRTATVRTISEVDCLVLTEKSLDAICLEYPDIQRKIETTAKQRLDINQSHQSSTNTYNTINELGDPLYTNST
SSIPSTNASTPENESNNNQNTTEESAVDTLYLHKHRNRHSSVSTSSSSDHGNSLDLKVKPLDQDPFAVTRGDRHKEHDES
LEGEDGVGLFSKSWNTAGMFDTALRPPVPEETLDPMDPRSPENSNFGNPENVSEVFSPVFKESFMSFSNDNSAFKPVNFA
GRRSSITQQQQQQQSQSPSQQQSPISPSFSNPFGGASSSLEQGPIDPYQAQSNDDPVQASNESIDPANRQARPHQPFSDQ
QQQVMALNDPFQQPQQYHYSIPQHQQPLQSALIQPGSGYPSRRNSKSVSLAIPEEDSVVEPESNLIIPTSESFDNLNNRR
RRFSQTTPSSAPPPALAGIGGFLLHPRAKKARYGSRRRSSLFNIGPFPDMIQLKIFQYLNIKELMRLRRVCQHWRQILQS
SSNLMKVLDLTEFNTTITDKSIVQITNFVGTRPKIVDISNCFHLTDEGFSYLVNGIGLAKIQVFKMKSVWEVSGMAIIDL
TVPSIGSDLKEIDLSNCRKVGDSTLSRLIGWVVPPQQYQPGDPNYVSTPDNNQYMQPGTVVGCPKLTKISLSYCKHITDR
SMYHMAMFASDRLEYLNLTRCTSITDHGFSYWALRHFTSLTYLCLADCTFLTDKAIMSIASAAKHLESLILSFCCALTDV
SVEVLALGCPALKTLDLAFCGSAVSDASLTAVSLHLIELQSLSVRGCIRVTAAGINRLLTDCHRLQYLDITQCRNVSGPL
AIPASIRLHSLNDDDDDDDDVEDDAIVTSLARSSSSDASALSLRSSSLTQGRPKRPKSQKLYELKDGSPSPFSHTAHPAH
SSKSNIIQHISNTSPELIAQRRHEKEQQILRRRTRSQQLQLRRSIIQNATSARAVAAAVASASSTTTQQQQQQQPFSPLH
HENTNTQTDYFDQQQQQQQQQHAPPLPPPPQFQPTFQNPFSQELYPQQPSSPGHQLPLPHQQPTTSPSNPGNNNQSHQPH
PPPPPPPPPHNYRQ

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.