Protein
MCA_05575_1
Length
1,207 amino acids
Browser: contigD:1682268-1686117+
RNA-seq: read pairs 1608, FPKM 16.4, percentile rank 36.2% (100% = highest expression)
Protein function
| KEGG: | K06671 | STAG1_2 | cohesin complex subunit SA-1/2 |
|---|---|---|---|
| EGGNOG: | 0PHYP | COHESIN | cohesin complex subunit |
| SGD closest match: | S000001288 | IRR1 | Cohesin subunit SCC3 |
| CGD closest match: | CAL0000190837 | IRR1 | Irr1p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00422_1 | 48.71% | 1047 | 0.0 | MIA_00422_1 |
| A0A0J9XKC9_GEOCN | 44.59% | 1025 | 0.0 | Similar to Saccharomyces cerevisiae YIL026C IRR1 Subunit of the cohesin complex OS=Geotrichum candidum GN=BN980_GECA22s01132g PE=4 SV=1 |
| UniRef50_A0A0J9XKC9 | 44.59% | 1025 | 0.0 | Similar to Saccharomyces cerevisiae YIL026C IRR1 Subunit of the cohesin complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XKC9_GEOCN |
| A0A1E3PFG3_9ASCO | 39.08% | 696 | 3e-143 | STAG-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53085 PE=4 SV=1 |
| Q6C144_YARLI | 31.70% | 675 | 1e-94 | YALI0F19382p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F19382g PE=4 SV=1 |
| A0A161HHW1_9ASCO | 27.85% | 894 | 2e-89 | Irr1p OS=Sugiyamaella lignohabitans GN=IRR1 PE=4 SV=1 |
| A0A060SYR0_BLAAD | 29.94% | 638 | 1e-84 | ARAD1C02992p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C02992g PE=4 SV=1 |
| A0A1D8PFW4_CANAL | 33.78% | 373 | 9e-53 | Irr1p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=IRR1 PE=4 SV=1 |
| SCC3_YEAST | 33.99% | 356 | 1e-49 | Cohesin subunit SCC3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRR1 PE=1 SV=1 |
| A0A1E4TJL2_9ASCO | 25.88% | 340 | 2e-17 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_534 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1322
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
200
400
600
800
1000
1207
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05575_1 MSVNPDTSETQVRRSTRTRTQVRSYNPQEEVENEISSEEEENLNSENSDVGEAPKTISKSKKRRAKNAPTQTRFKKRQTT QPPKQPTEQASFENYIYDSIIDPEASIDELASGWIESYIENSYTAIKDIINFILKSCGCGFPVELHDVEEPDSAVETLSQ IQEAFKSDALADYCLVSKKAAFSMFRSNLIKFCQDIIHKAAEQGILYENSQFMEDLKIWITSLSSSNLRSFRHTSTLIWL AIMEKLCELHVAATHVSSINQKIIEKENSKTRPNVARIEQAESSVSLANSKKEFIEGTMSDIFETVFVHRYRDVDFKIRV ECMKSLGTWMLMLPEFFLESTYIRYFGWLLSDINNQVRVQVVRSLVKLYKIQDNISGFRQFTERFRSRIVEMSVLDSDTT VRAASIELLTILRELGFLENSDIEVICGLIFDKEARIRRAAAKFTLDHVIDESSESLNKFSAKDLKTCKSKFSTFDASWL AFKELAYVLKSQISTATTLRADDTVLRDLEELYPSSETRVTLAGEAIWAAGFESHYKWTALIDQLLFDFSSFDEQIESRT DRSYVELYSLEPDDENILVELLFGFIKGNLMEIDRHHFNSLISHSNIKKKRVSRDDLEAIHTQIQAELVDSIPKLVKHYS HNPKALSSILKLHDLLDLGIYRQLHFEPKYMEFIQMVIGQFKAQNDKEVLEECVNIFHKSLNDDSALSFTEEVRLALKDL LGDIGYEIQQCIISNPSNNEDDNNKEIEKAILEPTLKLDVISRVVDIQSTLELPLTEDENSTESNSETIIQKFSKIFSNI SMMASENINLTLASSLINILKSYCMWKLSSVNFAATTTAVGNGTSKVVDLNAGTTEFITSIIQEFELVIEQAFSFEVRTM TSKALLDLLIAVNVTVMQVSLLPSSSTNFQILELPRKASTITQQQIMGIFLKKESAYAKSNKVTLDVGPEDSVYLKSLRS NKITSIKKALTTEDDSDSELSELSDSEDEEDDVATFHDNMEDGSTQFTNPESFQIQTVQSHEALRQITEQNSKSQQLLLL LECDLCQYAAKIRVAAVAKVIDFSLAKRIFLNAKHLSPLYNKVMEVNISSANEEKESRPGSHSNPAPGETEPTTENGTTT AATDNNVKGTETNEEVPNSENPKSTHNDEPIEVEMTEENREEPAEQLEEGNIDKDRSLEDLEFQRNLELELQKELNMGLN DDDNNES
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005488 binding
Cellular Component
None predicted.