Protein
MCA_05560_1
Length
485 amino acids
Gene name: SOF1
Description: Protein SOF1
Browser: contigD:1645406-1646864+
RNA-seq: read pairs 1946, FPKM 49.5, percentile rank 65.2% (100% = highest expression)
Protein function
| Annotation: | SOF1 | Protein SOF1 | |
|---|---|---|---|
| KEGG: | K11806 | WDSOF1 | WD repeat and SOF domain-containing protein 1 |
| EGGNOG: | 0PGD7 | SOF1 | Small nucleolar |
| SGD closest match: | S000003934 | SOF1 | Protein SOF1 |
| CGD closest match: | CAL0000196031 | SOF1 | rRNA-processing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02759_1 | 81.84% | 468 | 0.0 | MIA_02759_1 |
| A0A0J9X8W6_GEOCN | 66.60% | 467 | 0.0 | Similar to Saccharomyces cerevisiae YLL011W SOF1 Essential protein required for biogenesis of 40S (Small) ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA06s01709g PE=4 SV=1 |
| A0A1E3PHM5_9ASCO | 61.46% | 467 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_43018 PE=4 SV=1 |
| A0A060T2U2_BLAAD | 62.41% | 415 | 0.0 | ARAD1C27896p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C27896g PE=4 SV=1 |
| A0A167FNS7_9ASCO | 62.89% | 415 | 0.0 | Sof1p OS=Sugiyamaella lignohabitans GN=SOF1 PE=4 SV=1 |
| UniRef50_L0P944 | 53.55% | 465 | 0.0 | Uncharacterized protein n=2 Tax=Pneumocystis jiroveci TaxID=42068 RepID=L0P944_PNEJ8 |
| A0A1E4TEY7_9ASCO | 54.82% | 467 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31249 PE=4 SV=1 |
| Q6C949_YARLI | 54.16% | 469 | 0.0 | YALI0D14080p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D14080g PE=4 SV=1 |
| DCA13_YEAST | 51.46% | 478 | 0.0 | Protein SOF1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SOF1 PE=1 SV=1 |
| Q5A7Q9_CANAL | 56.58% | 433 | 2e-174 | rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SOF1 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4802
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
450
485
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MCA_05560_1 MKIKTISRSSTNYIPVQADDSQRLPRNLNPALHPFERAREYTRALNATKLDRVFAQPFVGQFGRGHVDGVYSIAKNTRAL AYIATGSGDGVVKLWDMSEQEEVLSVDAHADIVRGMTVNNDGNLLSCSSDKTVKLWDVSSKTIQRLKEKRDKQRGRGGQG TGGDDEDSHKPLEVYKGTGAFMGLDHHRDEPKFVTAGDTVELWDTARTNRPISNMTWGADSVSTVKFNMTETSIVATAGS DRSIVLYDIRTATPIQKMVSTLRTNAISWNPMEAFHFCAGSEDHNVYLYDMRNLNKALNVMKDHVAAVMDVDFDPTGQEI VSASYDRTLRIYRAREGHSRDIYHTKRMQHVFCARFTTDSKFIVSGSDDGNVRLWRRNASERVAIMNSRQLAKKNYNDAL RERYKHMHDVRRIARHRQVPIAVKRAGDTKREEIAKIKHKEDNLRRNSKKGTVPIIPERKKHILSTALENPDLEDKKKKK NDDDE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.