Protein

MCA_05478_1

Length
702 amino acids

Browser: contigD:1424909-1427018-

RNA-seq: read pairs 2521, FPKM 44.3, percentile rank 62.6% (100% = highest expression)

Protein alignments

%idAln lengthE-value

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0652

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 702

Detailed signature matches

  1. Domain IPR000536
    Nuclear hormone receptor, ligand-binding domain
    1. SSF48508 (Nuclear r...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. CYTOPLASMIC_D... (C...)
  2. NON_CYTOPLASM... (N...)
  3. TRANSMEMBRANE (Tran...)

Protein sequence

>MCA_05478_1
MSFCTLESLPPDLIYSLHPYLSGFDTLSLSQTCSSLRLKCRHLVYRTCMYATALDLDVNYHRAVWASRKTFKDRNFNYAP
QMAFYQPDRYSWMSTLFITRVYLVIPLELFSPPYPILNEDHIQRYFPRLKSITLVNLCLKTTTVPSNCLLKLLHLFNLPK
NRHISFSYISNDVRGTPLDFRGFKHFSTASFHSLLNSLSISCFSPDDSLQRLQLDSQPLSNLKSINIGFLCESCLQRTPN
PLELDLFQNLLQRLPRLQNLSIYNIKVFFFIPITNLIHSTFTIPEDQNRFQLKKCNLGFLVHSLEPFVIDYRNPTLPNLS
HVDNLSFKFCNSPNTQVYLEPLLKTRYWLKRSNPKMNLDILHDCHNSYFIQNFTTTKQIVTMLTSLTIELRTDPETSFVG
EDRVKLNKYPNFPNLKVLNINTGAGLKCPAEVLSGDCCSKLHIPHTPIQIFLVAFFQYPMLVKQLIQLPRKDICEWTNDG
EGDSMGTLFGIIYCRLHQDILVMQQYPLNQEQYIFIKHWLPFLICVLIFGVGDKRSFISNCMQFLDSVMNSCTKDPFLKD
RYSELSPVLMDYDILTYLSLMGLTEDICQFVLDHPHLQDVSLGSSFHLTNSPRFRFYLCRAFCKNSHINNLYFEERLKPI
QKESLMWPESMKNKISSYTLSRVSSVCNKYVADREVDALSWRKKTLPNFPKLNSTGYLGYHW

GO term prediction

Biological Process

GO:0006355 regulation of transcription, DNA-templated
GO:0043401 steroid hormone mediated signaling pathway

Molecular Function

None predicted.

Cellular Component

None predicted.