Protein

MCA_05452_1

Length
732 amino acids

Description: weakly homologous to Rec8, meiosis-specific component of the sister chromatid cohesion complex

Browser: contigD:1355149-1357411-

RNA-seq: read pairs 39, FPKM 0.7, percentile rank 7.8% (100% = highest expression)

Protein function

Annotation:weakly homologous to Rec8, meiosis-specific component of the sister chromatid cohesion complex
EGGNOG:0PKB2FG08576.1Rad21 Rec8 N terminal
SGD closest match:S000006211REC8Meiotic recombination protein REC8

Protein alignments

%idAln lengthE-value
MIA_04936_150.81%1248e-22MIA_04936_1
UniRef50_K0KPY053.33%754e-17Double-strand-break repair protein n=1 Tax=Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031) TaxID=1206466 RepID=K0KPY0_WICCF
A0A0J9XAM0_GEOCN51.09%929e-17Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA08s00527g PE=4 SV=1
Q6CI41_YARLI29.21%892e-08YALI0A01980p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A01980g PE=4 SV=1
REC8_YEAST28.57%842e-06Meiotic recombination protein REC8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=REC8 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.5296
Predicted cleavage: 29

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 100 200 300 400 500 600 732

Detailed signature matches

  1. Domain IPR006910
    Rad21/Rec8-like protein, N-terminal
    1. PF04825 (Rad21_Rec8_N)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.10...
  3. mobidb-lite (disord...)

Protein sequence

>MCA_05452_1
MFYSTDLLTSQTSGLSTLWLISTLGLRPSSKKLTKRDIQSTELPKVCQMIVNPSVPLALRLSSNLLYGASLVFKHQTDYL
YSDVASIREKVARTNLTTKKSNLQMVRSSNVNRITLRNDAEFYFSLNLLPPPPKLGLDVDSSILKEAGLEREESSDDSDD
PEYGKSSGPSLTRKKKKSKSNNKPTQLLLLSSGEETQTTQEMWGNTLIESNEFRVSSDYLHQYPEVGDFDLGLDFSDDFG
GAISGGQASSEEAPQEGYPLKDRPINHQELPEYKDDRFELNLDDGMNEAFEIPDFPDTFPNNQLRADGGLHNSNRLLDDD
NTLNSEKDAASSNVLAHGEKLFVDDNVHVRRSRRKRRCEYDEHPTIPAADLRGYNVNYRQNMNLILMGNIQKKMRASYKT
TKASVQQYARIALDPLVNDLFGQQIHSMLQDSNIDADNHRLSITSQSRNGNFGTNWFPRAPEIGRARVPSVENARSGSMT
PPYSMQSNSMRIDSSERSRRLGSSSSLMRVPSAGAFPMVAHIESPIRAGMESFDDDGYLDLGGNSSSFDYDPYQAVDGED
LKWLQERGIDLGGPSKKDQKLADKLRTQYRKLRQKSDVEGGGFMKLSNYESSESSSYSEEEDDGSNSSKKFSKTKFTNHK
MFLKSMKDTITANEKEGSISKKEYSSNDLLINNNNGFVPFEMFVPPQSVSRKQAANAFLQVLILTTKRKAKVYQEPSESR
GFNSTGIWVKVL

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.