Protein

MCA_05416_1

Length
974 amino acids

Gene name: YCG1

Description: Condensin complex subunit 3

Browser: contigD:1272370-1275356+

RNA-seq: read pairs 736, FPKM 9.3, percentile rank 24.9% (100% = highest expression)

Protein function

Annotation:YCG1Condensin complex subunit 3
KEGG:K06678YCG1 condensin complex subunit 3
EGGNOG:0PH2XPGUG_00662condensin complex
SGD closest match:S000002733YCG1Condensin complex subunit 3
CGD closest match:CAL0000181424YCG1Condensin subunit

Protein alignments

%idAln lengthE-value
A0A0J9XKB5_GEOCN47.66%8540.0Similar to Saccharomyces cerevisiae YDR325W YCG1 Subunit of the condensin complex OS=Geotrichum candidum GN=BN980_GECA22s00934g PE=4 SV=1
UniRef50_A0A0J9XKB547.66%8540.0Similar to Saccharomyces cerevisiae YDR325W YCG1 Subunit of the condensin complex n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XKB5_GEOCN
MIA_03599_144.60%8790.0MIA_03599_1
A0A060SX17_BLAAD44.14%8450.0ARAD1A09878p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A09878g PE=4 SV=1
A0A1E3PNE5_9ASCO45.73%7500.0Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13391 PE=4 SV=1
Q6C2E0_YARLI39.23%8364e-167YALI0F08679p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F08679g PE=4 SV=1
A0A167FC97_9ASCO43.75%6725e-157Ycg1p OS=Sugiyamaella lignohabitans GN=YCG1 PE=4 SV=1
CND3_YEAST34.06%9222e-129Condensin complex subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCG1 PE=1 SV=2
A0A1E4TLN8_9ASCO31.49%8864e-110Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_90069 PE=4 SV=1
A0A1D8PJE8_CANAL34.39%4103e-51Condensin subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=YCG1 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0014

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 900 974

Detailed signature matches

  1. Domain IPR016024
    Armadillo-type fold
    1. SSF48371 (ARM repeat)
  2. Domain IPR011989
    Armadillo-like helical
    1. G3DSA:1.25.10.10
  3. Domain IPR025977
    Nuclear condensin complex subunit 3, C-terminal domain
    1. PF12719 (Cnd3)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. NON_CYTOPLASM... (N...)
  3. SIGNAL_PEPTIDE (Sig...)
  4. SIGNAL_PEPTID... (S...)
  5. SIGNAL_PEPTID... (S...)
  6. SIGNAL_PEPTID... (S...)
  7. mobidb-lite (disord...)

Protein sequence

>MCA_05416_1
MYLSGFLVLTLKQQHKQENQNIPSIDHSKTVAIQKLAVNANDNNNIITPLMSVNTPSESDILKLHSLIADEFQDAQRSIA
THRKIVASLANIQYQAAQHGMELEFNKAYARYMNLVLTVKKSEPVGDRLVTLCRTFCEYIKRQYSNKDEKEDVDLIGEDE
EEDTIATRFAEYMIYHFLRGVTAKNKIVRMRCCQFLSSIINTLEEISDDLYAVIKSNLCNRLYDKEPSVRLYAAYSLTRL
QDNPEDLENGPGSEVSITKVLLKVLENDPSAEVRRAILLNLDKNKKTTKYLIKRALDVNPINRKYVYSKVVKEIGDFRKL
SIQMRERLLQWGLQDRDEKVKQAATKMLLTQWIDNVDGNLGELLERIDVVNSPDIAKSALDVFFSNKKDSIADLNFDDKF
WMALTPELVFLAKTLNEFCVQEKMNSVIEQKMPELTKLGFILEHYQHILEEEPTSADTQFIVEQLLAIAETYDYADEVGR
RKMLAILRNLVTNQVLLVDNIIFKAVNIIRKISVNENDFSQVVVELISDIKDDLEESLQKLKESAVSEEDYESQSDKLQA
ERLGRCLVISQGTLELITLPLESNTYLEALLDTLIGPSIRSHFVEIRERGLKCLGLCCLIGRKLARKSILLFGQCFTKGD
EALKALSIKILTDLFMVHGCDILNDEPEDDEEEVVIELKSIQKLYYRAIQNDDLEVQSIAAISLCKLLLNGIFDEPDLLK
ALVVQYFSYFTSENETLRQALSYCIPVYCYSSPDRQRVMALIAVDSLIRLAAVYESAIENEETMLNPTQIFQQIIDWTDP
ARVVVLDADKQKLVNNGGYPDVQCDLAFEVLRQIENTLAKEEKKTLCLSLNKLKIGPNIDVEKLRALKEEVEHIIAANLV
TESLLKNAINRFLKSLIVTISQAVQNNNNNNNNNNTGDAIEMEIEDEGTENVTVIAPENAAGEEENENSDNEDTGTEGED
EDASDTEITEITER

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005488 binding

Cellular Component

None predicted.