Protein
MCA_05415_1
Length
822 amino acids
Gene name: UTP4
Description: U3 small nucleolar RNA-associated protein 4
Browser: contigD:1269625-1272156-
RNA-seq: read pairs 1233, FPKM 18.5, percentile rank 39.3% (100% = highest expression)
Protein function
| Annotation: | UTP4 | U3 small nucleolar RNA-associated protein 4 | |
|---|---|---|---|
| KEGG: | K14548 | UTP4 | U3 small nucleolar RNA-associated protein 4 |
| EGGNOG: | 0PFRR | UTP4 | U3 small nucleolar RNA-associated protein |
| SGD closest match: | S000002732 | UTP4 | U3 small nucleolar RNA-associated protein 4 |
| CGD closest match: | CAL0000184134 | UTP4 | Utp4p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03600_1 | 57.97% | 828 | 0.0 | MIA_03600_1 |
| A0A0J9X918_GEOCN | 47.54% | 835 | 0.0 | Similar to Saccharomyces cerevisiae YDR324C UTP4 Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes OS=Geotrichum candidum GN=BN980_GECA05s06390g PE=4 SV=1 |
| A0A1E3PM21_9ASCO | 42.55% | 825 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50294 PE=4 SV=1 |
| A0A167FAR2_9ASCO | 42.09% | 822 | 0.0 | Utp4p OS=Sugiyamaella lignohabitans GN=UTP4 PE=4 SV=1 |
| UniRef50_A0A167FAR2 | 42.09% | 822 | 0.0 | Utp4p n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167FAR2_9ASCO |
| A0A060SY60_BLAAD | 39.61% | 823 | 0.0 | ARAD1A09856p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A09856g PE=4 SV=1 |
| A0A1D8PJD3_CANAL | 37.85% | 827 | 5e-161 | Utp4p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=UTP4 PE=4 SV=1 |
| UTP4_YEAST | 35.83% | 829 | 1e-134 | U3 small nucleolar RNA-associated protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UTP4 PE=1 SV=1 |
| Q6C2E1_YARLI | 39.94% | 711 | 7e-135 | YALI0F08657p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F08657g PE=4 SV=1 |
| A0A1E4T9V0_9ASCO | 34.28% | 703 | 5e-105 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_52449 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0649
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
822
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_05415_1 MSLDIHRCRFLDYNPSAITSLSFTTDSSTKTTASDVRLAVGRGNGNIEIWNPRHNWIHEITIQGGRERSVEALAWIINDD EPARLFSIGGSTSVTEWDLNTCLPINNYLANAGVIWSLAASPDNKKLAIGCDDGSVIILDVSGGRGSIEQQRILQRQTSR VLCLAWNGNDQIIGGLADARICVWSTLPEANGKILSVFKTDKSKYRESTLVWAIKTIGNDVLVSGDSTGSVKFWDLKKFS LLQSFSSHEADVLSLAVNTAGTTVYSAGVDRKIMCYQIVNKHSGRWAPMGSTLDHTHDIRALALHESSPKNNILVSGGVE TYIVVNNLNTFLFGSHKKISYTPQKPCVSSLPSKRLVMMWEGQTVKIWHLGKLSNLGDEESNQYVSIPVKGQKLISRITL SSDENITSAALSPNGRVLAVSTIAETKLFQLTPVYSDEDDYDDEDNITSLKVKKLTQYDLEEEGAKSLHFIEKDDQLKLL IHTPESELLIFSLNYDKEVEEYGLDMERRPFELNISDSKLAELGITPKKKKSTLGYLDSISLVKVSPKGDLVTTSTFNGI VALYDISKIYEESHSTEDEEESNPTISGIVLGNFTVYPTAFCFTELDTLVVVTAEIRVFEYSIIRNGSELRAELTPWAKT NAELLPQELSEAKDKCRGIFYIPGKSRRLWLWSGSWVAFLDTSVDIPVKRIPKRQASGQFNQHYGPNDGLGLVADEDVIM EDLEQDKSKSSNKRDNKKRSNKATTNGSKNTELNINDNENSSVAEVDDSISMLGRQAFWVTYKYHPILYAGPFGPKEMVI AERPRMSLKLPPAFWSNHKVSF
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.